Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0327 ATGGATTATGAGGCTGATGGTTTTGGTGCCAATGGCGAGGGAGAGAGCAAGAGAGTGGGTGAAGGCGTTTCTGAGGAGATTTTGAAGAGTTTAGATGTAGAGGACGATTTTCAGGAGGCAATGGAGCCACGGGACCAGGTTCGTGATCAAGGATCCGAACTCCGTTCGGAGGAGGCCATAGTTGATAAACTGGATGATACCAACGCTGGTAGTTCATTGACTTCAGTTCTGGTGGATGCACAAAGTTCAGATGTCGTTCAGGAGCCTGATTCCTCTAAGGAGGCCATTGGGGCTGATTCTGGGTATGGGAAGCTGGGTGAAACTGATTTAATTGCTAATCAGGATTTGGAAAGGGATGGGCCGCCGGGAAATGATACTGTTCATCTGGATGGCGTTGATTCTGGGGTGTCTGGAGATGAAGATTTTTTTGATGGTTCTAATGGTGTGGAGGAGGATAATTTGGAGCAAAATGATGAGATAGGTGGAAAGGAAGAGTCTGGGTTAAATTCTGACGTAGAGGTGTCAGATAAGGAGAATGGTTTTGTGGTGGATGAAAACTCTGGTTTGACGAGTGATAAGGCTGAATTTGATGATGCTGAATTCAAAACTCCTAGAGCAAATGGTGGTACAACGTTGGATGATGTAAACACTGACAAGGAGGACGGTTTGGACACTGAAGTTATTATCAAATCTGAATCTGGTGTGGTGATTCCAGCTGAAGGTACCGACGATGGGGATTTGAAGAAGTTTGATGCAGATCCTGAAATTGGAGATGGCAATACAGAGGTGGAGTTAAATGATTCAGCTGATTCTTCGGGTGAGATTCAAGATGATACATGTGAAGAAGTACATGCCACTTCAGCTGACACGACTTTAGAACAACAGGATGAAGTTACTAGGGATGTGAAGGATGCTAGTCTGGGCACTGATATAAGCCATGAGGATAAAAATGAAGAAGAAACGAGTGCCCCTGACATTCAGAATGCTGAATTAACTGGTTATGGAAATGGTGATGCCGAAGATGAAAGCTCATCCTCTTTGGAAAATCCCTCAACTAAGGAGACATTGCCTATTCAGGATGGTAGTGCAGCTGATCCAAATGAAGGAAGTAATAAGGATGATCAAGCTCAGATTTCAGATGAAAATCATAGAGATGATGAGAACTCTTGTGTGGTTGAAGAGCCTGAAAGGATACTGGAGAAGATTATTAAAGAGACAGAAACCACACAAGAGACAGGAACCATACTAGAGACCGGAGAGCAACCTGTTCAACCTTCCTCAGATGTTTCTTCGTCTGAAAGGTCTGCTGATACTGGGCCTCCTCCTGTTCATCCTTCATCTGAAAATTCTGCTGGTGCTGGACCCACTCCTGTTCGTCCCGCTGGCCTTGGTCGTGCAGCTCCATTGCTGGAACCTGCATCTCGGGTGGTGCAGCAGCCTCGTGCTAATGGTACCGTGTCTAACGCTCAAGCCCAGCAAATGGAGGATTCCTCGAGTGGGGAGGCTGAGGAGTATGACGAGACACGGGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTAGCTGAGCAACTAAGAGGAAGGAATGGGGGCCGTGTTGGTGCTTTTAGCTTTGACCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCTGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATTATGGTCCTTGGAAAGACTGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGACGAGGTTAAGTTTAATACCAGTGCTTTTAGTATGGGAACCAAGAAGGTTCAGGATGTCGTGGGAACAGTCCAGGGTATTAAGGTACGGGTCATTGATACACCAGGACTTCTACCTTCCTGGTCAGACCAGCGAAGCAACGAGAAGATCCTCCTCTCTGTTAAGAACTTCATTAAGAAAACTCCTCCTGATATCGTGTTGTATCTTGATAGGTTAGATATGCAAAGTAGGGATTTTAGTGACATGCCACTCTTACGCACAATTACGGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCAGCATCTGCTCCTCCTGAAGGCCCCAATGGCACTGCTTCCAGTTACGACATGTTTGTTACTCAGCGTTCTCATGTCGTGCAGCAAGCCATTCGCCAAGCAGCAGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTAGAGAACCATTCTGCTTGCCGAACAAACAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAGCCTCATTTGTTACTTCTATCTTTTGCCTCTAAAATTCTGGCCGAAGCAAATGCTCTTCTTAAGTTACAAGATAGTCCACCTGGGAAGCCTTATATAGCTCGAGCACGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAATCACGACCACAGTTAAAGTTACCGGAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGATGAGGCATCAGAGTCTGATGATGAGAATGAACATGATGACCTGCCGCCATTTAAACCTTTAACAAAGGCTCAGGTGGAAAAGCTGTCTAAAGCTCATAAAAAAGCATATTTTGATGAGTTAGAATATAGGGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAGAAAGCGACGGAAATTGATGAAGAAAATGGCAGAAGCAGCAAAAGATCTACCTAGTGATTACAGTGAAAATGCGGAAGAAGAAGGTGGTGGTGCAGCTTCTGTTCCTGTCCCGATGCCAGATTTGGCCCTTCCTGCATCTTTTGATTCTGATAACCCCACTCACCGGTATCGTTATCTTGATTCATCAAACCAGTGGCTTGTTAGACCTGTTCTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGCCTGAATGTAGAAAGATTGTTCGTTGTCAAGGACAGGATACCTTTGTCTTTCACGGGTCAGGTTACTAAAGATAAAAAGGATGCCAATGTTCAGATGGAAATAGCCGGTTCAGTTAAGCACGGGGAAGGGAAAGCAACTTCATTAGGATTTGATATGCAGACCGTGGGCAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAAGGCAACCGCTGGTCTATCGTTTACTTTGCTTGGTGATGCCTTATCAGGTGGAGTTAAGATTGAAGACAAATTGGTTGCCAGTAAGCGGTTCAAGGTGGTTATCAGTGGTGGTGCAATGGCAGGGCGCAACGACATTGCATATGGTGGCAGTTTGGAGGCCCAATTGAGAGATAAGGATTATCCTTTGGGTCGTTTCTTATCTACTCTCGGGCTCTCTGTTATGGATTGGCATGGGGATCTTGCTGTTGGGTGCAATGTGCAATCTCAAATCCCAGTTGGACGACATACAAACCTGGTTGCCCGGGCGAATTTGAACAATCGAGGGGCAGGACAAATAAGTATTCGATTAAACAGTTCAGAACAGCTTCAAATTGCTTTGGTTGCTCTCATTCCTCTCGTAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAGTATGGGCAATATTAA 3648 0.4496 MDYEADGFGANGEGESKRVGEGVSEEILKSLDVEDDFQEAMEPRDQVRDQGSELRSEEAIVDKLDDTNAGSSLTSVLVDAQSSDVVQEPDSSKEAIGADSGYGKLGETDLIANQDLERDGPPGNDTVHLDGVDSGVSGDEDFFDGSNGVEEDNLEQNDEIGGKEESGLNSDVEVSDKENGFVVDENSGLTSDKAEFDDAEFKTPRANGGTTLDDVNTDKEDGLDTEVIIKSESGVVIPAEGTDDGDLKKFDADPEIGDGNTEVELNDSADSSGEIQDDTCEEVHATSADTTLEQQDEVTRDVKDASLGTDISHEDKNEEETSAPDIQNAELTGYGNGDAEDESSSSLENPSTKETLPIQDGSAADPNEGSNKDDQAQISDENHRDDENSCVVEEPERILEKIIKETETTQETGTILETGEQPVQPSSDVSSSERSADTGPPPVHPSSENSAGAGPTPVRPAGLGRAAPLLEPASRVVQQPRANGTVSNAQAQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFSMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKNFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARARAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDEASESDDENEHDDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEERKRRKLMKKMAEAAKDLPSDYSENAEEEGGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDRIPLSFTGQVTKDKKDANVQMEIAGSVKHGEGKATSLGFDMQTVGKDLAYTLRSETRFTNFRRNKATAGLSFTLLGDALSGGVKIEDKLVASKRFKVVISGGAMAGRNDIAYGGSLEAQLRDKDYPLGRFLSTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQIALVALIPLVKKLVGYPQQLQYGQY* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0327 1215 MobiDBLite consensus disorder prediction 1 67 - -
Vra2g0327 1215 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 377 1209 IPR045058 -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 242 256 - -
Vra2g0327 1215 Pfam AIG1 family 583 716 IPR006703 GO:0005525
Vra2g0327 1215 MobiDBLite consensus disorder prediction 144 158 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 159 180 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 836 870 - -
Vra2g0327 1215 ProSiteProfiles AIG1-type G domain profile. 580 809 IPR006703 GO:0005525
Vra2g0327 1215 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 377 1209 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 338 373 - -
Vra2g0327 1215 CDD Toc34_like 555 800 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 922 944 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 237 507 - -
Vra2g0327 1215 Gene3D - 552 800 IPR027417 -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 374 407 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 294 323 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 80 219 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 408 453 - -
Vra2g0327 1215 Coils Coil 903 923 - -
Vra2g0327 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 717 IPR027417 -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 841 861 - -
Vra2g0327 1215 Pfam Translocase of chloroplast 159/132, membrane anchor domain 941 1204 IPR024283 -
Vra2g0327 1215 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 459 1215 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Vra2g0327 1215 MobiDBLite consensus disorder prediction 478 498 - -
Vra2g0327 1215 MobiDBLite consensus disorder prediction 18 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0327 Vra-Chr2 2500422 2504921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0327 - - gmx:100810931 1838.16