Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0324 ATGAGTCTCATGTTTCTGCTATGTGTCATCCTTTTGAGAGGTTTTGAAGTCGACGCATTATCCTATGATTATTCTGCAAGTATTGAATGTCTTACACAACCATTGAAGCCTCAATACAATGGAGGAATAATCCGAAACCCAGATCTAAATAATGGACTTGAAGGATGGAATTCATTCGGGGATGCAAAAATAGAACACAGAGAATCATCAGGCAACAAATACGTGGTAGCACATAGCAGAAAACATGCACATGACAGTGTCTCTCAAAAGATTTCTATCGAAAAGGGCAAACATTATACTCTGTCTGCTTGGATACAAGTAAGTGCAGGGAATGTCCTTGTAACTGCAATTGTGAAAACAAGCAAAAATTACAACTTTGCTGGTGCCATTTTTGCTGAGAGTGAGTGTTGGTCTATGCTTAAGGGTGGTTTCACAGCTCAAGATTCAGGACCAGCAGAGCTCTATTTCGAGGGCAATAATACCTCTGTCGAAATATGGATAGACAATGTTTCCTTACAACCATTCACAGATGAAGAATGGAGTTCTCATCAAGATCAGAGCATTGAGCAGAATCGTAAGAGGAAGGTATTAATCCGAGCACAAGATGAACAAGGAAAGCCATTAGCAAATGCAAAGGTATCATTTGAAATGAAGAAGGCAAGTTTTCCGTTTGGGAGTTCGATGAATAAATACATCTTAAACAATGCGTTATACCAAAACTGGTTCGCCTCTAGATTCACAGTGACAGCGTTTGAAAACGAAATGAAATGGTACAGCACTGAAAGTGTGCAAGGTAAGGAAGACTACACGGTTGCCGATGCTATGTTGCGGTTTGCCAAGAGCCACAACATAGATGTTCGAGGCCACAACATATTCTGGGATGATCCTAATTTCCAACCTGGTTGGGTTCCTTCACTGTCTCCAGCCCAACTAACTTCTGCAACAGAACAGAGGCTCAAATCTGTCGTGTCAAAATACAAAGGCAAGGTTATTGCATGGGACGTTGTAAACGAAAATCTACACTTCTCGTTCTTCGAAAGTAAACATGGACCAGACTTTTCGAGCAAAATTTTCGAGGAGGTTCATAATGTTGATGCAGGAACCACTTTGTTTCTGAACGAGTATAACACCATCGAGGACAATAAAGATAGTGTTGCAAGCCCAGCAAGGTACGTCCAGAAGATTAAACAAATTCAGAGTTATAAAAAGAACAGTGGAATCGCTTTGGGAATTGGGTTGGAGTCCCATTTCGGTGATAAGGGTATCAATTTTCCATACGTCAGATCATCTTTAGATTTTCTTGGTGCCACTCGTTTGCCCATTTGGATTACAGAATTTGATGTTGCAAATCAACCTAGACAGGTACAATACTTTGAGCTTGGTCTTAAAGAGCTACATAGTCACCCTATGGTTAAAGGTATTGTGATGTGGACAGCATTGTCACCACAAGGTTGCTACAGAATTTGCTTAACAGATAACAATTTCAAGAACTTACCAGCAGGGAACGTTGTGGACAGATTTATTTCTCAGTGGAAACCTAAGAATTTGTCTGGAGTTACAGATAAAAATGGATACCTTGAGCTCTCTCTTTTTCATGGTGATTACGAAATGAAGATAAGTCACCCTGTAAAAAACAATAGCACTTTCACACAAGCCCTAAAAGTATCTCCCCAAAATCAACCTAACAAAATAAAACAATTTGTAAAGCTTTCTGTGAAGTAA 1722 0.3972 MSLMFLLCVILLRGFEVDALSYDYSASIECLTQPLKPQYNGGIIRNPDLNNGLEGWNSFGDAKIEHRESSGNKYVVAHSRKHAHDSVSQKISIEKGKHYTLSAWIQVSAGNVLVTAIVKTSKNYNFAGAIFAESECWSMLKGGFTAQDSGPAELYFEGNNTSVEIWIDNVSLQPFTDEEWSSHQDQSIEQNRKRKVLIRAQDEQGKPLANAKVSFEMKKASFPFGSSMNKYILNNALYQNWFASRFTVTAFENEMKWYSTESVQGKEDYTVADAMLRFAKSHNIDVRGHNIFWDDPNFQPGWVPSLSPAQLTSATEQRLKSVVSKYKGKVIAWDVVNENLHFSFFESKHGPDFSSKIFEEVHNVDAGTTLFLNEYNTIEDNKDSVASPARYVQKIKQIQSYKKNSGIALGIGLESHFGDKGINFPYVRSSLDFLGATRLPIWITEFDVANQPRQVQYFELGLKELHSHPMVKGIVMWTALSPQGCYRICLTDNNFKNLPAGNVVDRFISQWKPKNLSGVTDKNGYLELSLFHGDYEMKISHPVKNNSTFTQALKVSPQNQPNKIKQFVKLSVK* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0324 573 SUPERFAMILY Galactose-binding domain-like 40 173 IPR008979 -
Vra2g0324 573 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 211 507 IPR001000 GO:0004553|GO:0005975
Vra2g0324 573 SMART glyco_10 255 507 IPR001000 GO:0004553|GO:0005975
Vra2g0324 573 Pfam Glycosyl hydrolase family 10 217 477 IPR001000 GO:0004553|GO:0005975
Vra2g0324 573 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 8 565 - -
Vra2g0324 573 Pfam Carbohydrate binding domain 42 158 IPR003305 GO:0016798
Vra2g0324 573 Gene3D - 32 175 - -
Vra2g0324 573 Coils Coil 570 573 - -
Vra2g0324 573 SUPERFAMILY (Trans)glycosidases 206 514 IPR017853 -
Vra2g0324 573 Gene3D Glycosidases 209 518 - -
Vra2g0324 573 PANTHER GLYCOSYL HYDROLASE 8 565 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0324 Vra-Chr2 2479818 2484210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0324 16 546 Glycoside Hydrolase AT4G33840 57.303 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0324 - - gmx:100775272 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0324 2 2479818 2484210 Vra2g0324 2 2479818 2484210 ECH