Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0321 ATGATACAATCAAACCCACCACTCATGCACCATTATGGAGCACTTCTCAGAAACTCTGGAGAACCCAAACAGGCTAAAACTTTTAATCTTCAAAACCCTTCTGCAGTGGATGCATGTGACCTACCTCTTATAGACCTTGCAGCTCTCAAAAGTTCTAATGAGAGAGACACAAAGGCTTGCACTGCAGCAATATGCAAGGCTGCATCAGAATGGGGATTTTTCCAAGTTGTAAACCATGGTATAAGCCATGACTTGCTCAGAAAAATGAGGAATGAACAAATGAAGTTGTTTGAAGTACCCTTTCAGAAGAAGATCACTTGCGGGCTTCTGAATAACCCTTATAGGTGGGGGACACCAACAGCTACACGTTCAACTCACTTCTCATGGTCTGAAGCATTCCACATTCCTCTCACAATGATCTCAGAAGCTGCTTCCTGGGGTGAATTCAGTTCTTTGAGAGAAGCAATAAATGAGTTTGCACCAGCGATGCTAGAAGTGTCTAGGTTGTTGGCAAGCATTCTAGCACAAAACTTGGGCTACCCAAAAGATACAGTTGAAAAACTGTGTGATGCAGGCACATGCTTTCTGCGATTAAATCACTATCCATGCTGCCCAAAATCTAAAGAAGAAATTTTTGGATTAGTGCCTCATACTGATAGTGATTTCCTTACAATTCTTTATCAAGATCAGGTCGGTGGACTCCAACTCATGAAAGATTCCAAATGGGTTGCTGTAAAACCAAACCCAGATGCTCTAATTGTTAACATTGGAGACCTTTTTCAGGCTTGGAGTAACGATGAGTACAGAAGCGTGGAGCACAAGGTTGTGGCCAATGACAAAATGGAAAGATACTCCGTAGCATACTTCCTATGCCCTTTTAACAATACTGTCATAAACGGCTGCAAAGGACCTTCTGTATATAGAAAGTTCACTTTTGGAGAATACAGACACCAAATTCAAGAAGATGTCAAGAAAATAGGGCATAAAATTGGACTATCAAGATTTAAACTTTAA 1014 0.4093 MIQSNPPLMHHYGALLRNSGEPKQAKTFNLQNPSAVDACDLPLIDLAALKSSNERDTKACTAAICKAASEWGFFQVVNHGISHDLLRKMRNEQMKLFEVPFQKKITCGLLNNPYRWGTPTATRSTHFSWSEAFHIPLTMISEAASWGEFSSLREAINEFAPAMLEVSRLLASILAQNLGYPKDTVEKLCDAGTCFLRLNHYPCCPKSKEEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNDEYRSVEHKVVANDKMERYSVAYFLCPFNNTVINGCKGPSVYRKFTFGEYRHQIQEDVKKIGHKIGLSRFKL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0321 337 Gene3D - 15 325 IPR027443 -
Vra2g0321 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 292 IPR005123 -
Vra2g0321 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 135 IPR026992 -
Vra2g0321 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 25 329 - -
Vra2g0321 337 PANTHER OS02G0630300 PROTEIN 25 329 - -
Vra2g0321 337 Pfam 2OG-Fe(II) oxygenase superfamily 195 292 IPR044861 -
Vra2g0321 337 SUPERFAMILY Clavaminate synthase-like 30 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0321 Vra-Chr2 2452467 2457159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0321 35 315 Glycosyltransferase AT5G59530 29.966 1.45e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0321 - K04125 var:108339477 679.093