Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0291 ATGGAGAAAGGGAAAGAAATGGCAGAGGGAGTGTTGCAGTTCGATGAGACAACGATAAGCGCTCAAAGAGCTGCAAGGAGTGGAAACTGGAGAATGTTCAAGAAAATCTTGGAGGAAGACCCAAAGCGTTTGGTGGAGCCTTTTGACTTGTTTGGGAACACTGCCATTCACATTGCAACACGTTCCAACAATCCAGGGCTTCTCCGTGAGTTGTTGGAAATGCTGAGTGAGAAGGAGAGGTGGCATGCATTGAGGAAGGGAAATTGTGTGAATAACACCCTTCTCCACGAGATCATCTTCTGTACTACGGTGGAGATGGCTGGTGTTGTGTTGAAGTTTGAGAATGAGGCTGCACCAGAAGACATAACAGAAGAAAAGAAAAGACAACCATTGCTAGAGATCGTAAATGACTCAGGTGAAACCCCTCTCTTTAGGGCTGCTAAACTTGGCAGGCTTAAGATGCTCAAGTATATGGCCAGTCATGCTGAGGGTGACATAAGAAGGCTTTTTGTTAGATTTGACAAATATTCCATTCTTCATGCAAGCATTCTTGGACAGTTTTTTGATGTTGCTATCTGGCTGTTGAATATGGATGAAAAACTAGCTCAACACAAGGATATGAATGGAATGACATGTCTTCAACTTCTATCCAATATGCCACTTGTATTTAGGAGCCAAGCACCTGCCATGGGAACAGTGAAGAATCTTATATATAACATGCTTCCTGAGGAAGGATATGAGATCCATGATGATGATGAAAATGGCAGTGCCGACTACTACACACGTCAAAGGAACGATATAGAAAGCGGCCAACAAGACAAGGCAAAGTTTCCTAGTTCAGAGTTTGATGGGATTGGACGTATATGGAAACTAAAGAAGCAGCATAAATTAGCTGAGCATCTGTCTGAGTTGTTAGTGGAGAAGGACTTTTCATGGCAGATTTCGTTTCATGAAAACTTCCAACCCTTGATTGTATTGCCGGTTCTTTCCTCCAAATCAGACAGGATAAAACACCTTCACCACACGAAGGAGATGCACAAGATCAACAGTGAAATGTCTCGTTCCAGAAGTTACAGACCTATAACCACCGCAATAAGTTTTCCCCATTCTCAGAACTACACGCCACTTCTCATGGCAGCTGGCTCAGGAATCGTGGAAATCGTTGGGAAAATCATTGACAGGTTTCCGGAGGCCATTTGTCACGTTAGCCAGGATGAACACAACGTTCTACACATGGCTGTGAAGCACCGTCAGCTGAAGATCTTTAACATGCTAAAGAAACATTCAGCATTCAAATCATTGATATTCCGGATAACTGCAGAAGGTCGTACTCTCTTGCACCAAATTTCGAGAATGGAGTTTTACGTAGAGCAGCACCTACCTGGTGTTGCATTCCAACTCCAAGACGAGCTGCGCTGGTACGAACGAGTGAAAGACATTGTTCCAGCATACTACCTGATGCACTGCGACAAAGACGGGCTAACAGCGGAAGATGTTTTGGAAATGGAGCATAGGGAGATGCACAAAGAAGCAAAAGGGTGGATTAAGGAAACGGCACAGTCATGCTCAACCGTGGCTGTCCTTGTTGCCACGGTGGTTTTTGCGGCGGCCTACACCATCCCAGGTGGCACTAATCAGAACAATGGCACGCCTTTGTTTCTGGGTTCTCGCGTGTTCCTGTTTTACACCGTGACGGACGTTGTGGCACTTGTGAGTTCACTGGCATCAGTGGTGATGTTTCTGTCAATCCTGACATCCCCTTTTGAGCTGTGGGATTTCCGAAGGTCTCTGCCGCAAAAACTGAGCTTAGGGTTTGCATGTCTCTTCTTCTCGCTGGTGTGCACGATGCTGACATTCAGTGCAACAGTTTTGCTGACCATTCGGTTGGAGAATCACCAGAAATGGGCTTCGGTTTTGTTTTGCTGTGCTGTGTTCTTTCCTGTGGCATTCTTTTGGAGAATGCAATTTCCACTTTACAAGATGATTCAACATCTCGCTAAGCGCCTTTTCAAGACGCTAAGACAAGCAGTGCCAACAACGTTTGTCAAATATTCCAGGAAAAGGGCTCAGACAAGAAATTATAACGTTATCAATGACTGA 2100 0.449 MEKGKEMAEGVLQFDETTISAQRAARSGNWRMFKKILEEDPKRLVEPFDLFGNTAIHIATRSNNPGLLRELLEMLSEKERWHALRKGNCVNNTLLHEIIFCTTVEMAGVVLKFENEAAPEDITEEKKRQPLLEIVNDSGETPLFRAAKLGRLKMLKYMASHAEGDIRRLFVRFDKYSILHASILGQFFDVAIWLLNMDEKLAQHKDMNGMTCLQLLSNMPLVFRSQAPAMGTVKNLIYNMLPEEGYEIHDDDENGSADYYTRQRNDIESGQQDKAKFPSSEFDGIGRIWKLKKQHKLAEHLSELLVEKDFSWQISFHENFQPLIVLPVLSSKSDRIKHLHHTKEMHKINSEMSRSRSYRPITTAISFPHSQNYTPLLMAAGSGIVEIVGKIIDRFPEAICHVSQDEHNVLHMAVKHRQLKIFNMLKKHSAFKSLIFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVKDIVPAYYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVAVLVATVVFAAAYTIPGGTNQNNGTPLFLGSRVFLFYTVTDVVALVSSLASVVMFLSILTSPFELWDFRRSLPQKLSLGFACLFFSLVCTMLTFSATVLLTIRLENHQKWASVLFCCAVFFPVAFFWRMQFPLYKMIQHLAKRLFKTLRQAVPTTFVKYSRKRAQTRNYNVIND* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0291 699 SMART ANK_2a 405 434 IPR002110 GO:0005515
Vra2g0291 699 SMART ANK_2a 138 168 IPR002110 GO:0005515
Vra2g0291 699 SMART ANK_2a 371 402 IPR002110 GO:0005515
Vra2g0291 699 SMART ANK_2a 174 203 IPR002110 GO:0005515
Vra2g0291 699 SMART ANK_2a 51 80 IPR002110 GO:0005515
Vra2g0291 699 Pfam Domain of unknown function 513 624 IPR026961 -
Vra2g0291 699 SUPERFAMILY Ankyrin repeat 366 452 IPR036770 -
Vra2g0291 699 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 42 667 - -
Vra2g0291 699 PANTHER CASKIN 42 667 - -
Vra2g0291 699 Gene3D - 345 508 IPR036770 -
Vra2g0291 699 SUPERFAMILY Ankyrin repeat 23 249 IPR036770 -
Vra2g0291 699 Gene3D - 12 254 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0291 Vra-Chr2 2202272 2205176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0291 131 668 Miscellaneous Gene Families AT5G54710 21.160 8.71e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0291 - - vun:114169248 1276.54