Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0287 ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAAGCGAAGGCAAATGGCCACTTGAGTTTGGGCGATCTTGTGCTTGCTAAGGTCAAGGGCTTCCCTGCGTGGCCTGCTAAGATAAGCAGGCCTGAGGATTGGGAGAAAATCCCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATTGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCAGTGAGGCTAAAAATAAGCTGTCAGCTCGTCTTCAAGGCAAGACTAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACAGAAGGCTAGTGGTTTGACAGATGACACTGACGATTCTCGTATTGGTTCAGAGGCTCCTTCTAATGATGGGATAGTAGTTAACCTTAAGGATGCAATTGACACTGTGTTATCAAATGCAGAACAAGATAACATTGATATGGAGAATATTGATTCTAATCTAGAGCACTGTACACCTAGATTAGGGCAAAATGACAGCCAAGATGAAAAACATTCTGTATCTGACCATCCAAACGAAAGTTCTTCTGTTTCATCACCAGTGATCAAAAGTAAATTATCCATGGGTTCGGAGCCAAAGAAGAATGGTAACAAATCAAGTCTTAAAGTTGCAAGTAATGTTAACGATTTTGGGCAAGATGATAACAGACATGGTGGTTTAGCAAATGGGACCAAGCCAAGAAAGCTTGCCAATGGTTTGCGAAAGAGAAGTGAAGCTGCAGGTGATAGAGATAGAAATGGTGGATCATCTACTGGAATTTTTAAGGCGGAAAATTGTACTGGTCGTGGTGACCTTTCTAGGTCCAGAGAAACAATGAAAGCTGGGAAGAAAAGAAAAAATGCATTTGATGTTAAATTGGATTCTCCAGATACTCTTAAATCAGACAACAATCATAATACTGGGGAAAAAGATAGCAGTATGATAAAAGTCAAAACAAGTCTTGAGGTAAAAAATGAGTTGCCTGAGTTCTCGGTTGATTCCAAGGATGCTGATGGTAAAAGTTCTAGTTTGCGGAAGAAGATGCAACTTCATGCAACCTATACTTTAGGGGCAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGCATGGATACCAAAGATGATTCAACTTTGGGATATCCTTCAAAAGTTCTGAAAAGAGCTTCACCTGGTTCTACAGTTATTGAAGAGAGACTATTTAAAAGGTCAGAATTGAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGTTATCAAGGGGTAAAATTGGTGGTGCAGTTTCTGATGATTCTGTCCATGAGCTGCTAGCAGCGACTAGACATCATATTCAGGTTCAAAAAGTTACGCCTGATTCTTCAGTCATTGCATCTGAGGAAAAGAAAGAAAGGAATTATCTCAGACTGAAAGGTGATACAAGTAATGTTATGATAAAACAAGTAGAGAGGAAACGTAGAGCTGTTTGTCTTTTTGATGATGATGATGACGAACCTAAAACTCCTGTTCATGGAGGAGCTGGAAAAAATGTTAAATCATCTTCTGTTTCTGATGCCAAGAAGAGCAACAATGCACACTCAGAGAAGTTGGATGTTGTTCCGCTCACTCAAGGAAGTTCTAGTGAGCGTGAGGATACCCATTTGAAAGAGCCATCATCTCAATTATATAACGACAGTTTGTCAATCAAGCAACCTCTAAAAGAGAAAGATAGAGAGAAAGATGACAAAGTTATTCCTGTGCATATTCCTCATAGTCCTGAAAATTTAGATTTGAAGCAGCTTCCCTCCAATATAGCAAAATTGAGCTCTACCTCCCCACTAAAATCACCTCAATCGGTACCTGCAAGCAAGTCGAGTGCTGAGCGGATTAAAGCTTCAAAGCTGTCACTTAAAGTTTCCAATAATGCAACTACTCAAAAGAGGGTTGATCATGGGCTTTCAAAGTATTCACATAACCTGAGCTCTTCTCAGAATCAAGTTGCTACACATAAAAAGAAGCCTGCATTGTCGGCAGAAATATCTAAAACTACACCTGAGACATTGCCTCAGGCAGTTGAAGTTCCTGTTTCAACAATTGGTTTTAAGGATACTGATGCTCTACATGTTGATAGATTGGAGGTAAGCACAGAAGGGAAAGGTACTATGAAGCATCTTATTGCTGCTGCCCTGGCGAAAAGGAAACAGGCTCATTCACAGTTTCTTCCCTCTGGCTTTCCTAGTGTTCAGGGGGGAACTCCTAGCCCGACTACAGTTCAGCCATTTCTGTCTGTCTCGAGCAATTTTCAGCATGCAGACATGCAAGGAGTTTATGAGCACACATCATTGGCCTCTCCACCAGCTAAAGAACATCCTTCTGCTTCTCATAATCAACTTGATGCTGATGAAGTTGAGGATAGAAGAGTTGATTCAGGGCAAAGGGGTCTAGGTGGCTCACTGAGTGGTGGTACTGAGGCTGCTGTTGCTCGGGATGCATTTGAAGGAATGATTGAAACATTGTCAAGGACCAAGGAAAGTATTGGTCGTGCAACCCGACTTGCCATTGACTGTGCCAAGTATGGCATTGCCAATGAGGTTGTTGAACTTCTCATACGAAAGCTGGAAAATGAAACTAGTTTTCACCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCACATAATCAAAAAGAGGAAATTTTAGGCATTGCAGGAGCATCCTACATTCCCACTGTTCAGGCAGCATTACCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCCAGTGCCCGCGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATATTTCCTGAATCAGTTCTTCGTGGTTATGTGGATGATATTGGAATTTCAAATGATGATATTACAGTTAGCTTTTCTCTTAGACGTCCATCTCGGGCAGAACGAGCTGTGGATGACCCTATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCAACATTTCAGCTGCCTGGCTTTTTATCCTCACATGCATTTGAAGAAGATGAAGACGAATATGAAGATGATATACCAATCAAATTGTGTAAGGAGACATTTGATGCATCTCCAGCAGATCCCACCCATACCCTTGGAGAATCAGAAACCTCTAATGTTACCCCAAATGACAAGCGCCATTGTATCTTAAAGGATGTGGATCGTGAGCTGGAAATGGAAGATGTTTCAGGTCATCCCAAGGAGGAAAGGCCAACATTTTTTAACAGTTCTGATGAAATTGATTTGCAACTTCAGGTGTCAGATAGCAATTTGGATCTGACTCCAAGCATTTCAAAAGAAATGTCAGCTACTCCTGAGGGTTCTCCTCCTTTGCCACTTGATTCACCTCCTCCACCCCCACCTTTGCCTTCATCACCACCACCCCCTCCTCCTCCATTATCACCATCTCCTCCCCCACCCCCACCACCCCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCATCAGCCCCTCCAGTGTCCTTGGTTCCTCAATCGTCAGGACCAGCTCGGCCACTTCTGTCCCAACCATTAATGCCATCTCAGTCATCACATCAGTCATCCCCACAGTTGGGGTATCAGCAGAGTGTACCTCATGACTTTAGTGGCACTAATAATGGTAACCAAATAGTTCCAATGGCTGGGAATTCATTTCCTGGAGGTCACAATAATGCAGCTGTCAAGAATGAAATATTTCCACAGCCTCCTGCTTATGCTCCAACAGCAGGTTGCAGCTCCCAGGAATCTTCTGGTTTTAACCCTTCAAGGCAATTAGAGTACGGACAGAATGATATGTATCTAAATGCTCAAGTTCCTCAACCTAACCATCAATTTCAGCAGGGCAATCCCCCATATGCACAAAGGCACACACATCCTGCCCCACCCCAAAATCCACCAAATCCGTACCCATATTCAAATCCTACAGTTCAGCAACATCTTCCACATTCATTCCATCCTCCCTTCCCTTTACCGTCTCTTCCTGATGGCAGGAGACAATTTGTTGCTGATGAGCAATGGCGAATGCCATCGAGTGAATATAAAACAAACAATCAACATAGTGTATGGAGAGGGAGAAATCCATCATGTCCTGGTCCACCCTATGGGCAAGAAGGTCATTTTCAGCCACCATTTGAAAGGACACCAGTAACCACTGTAGGTTTTCAGCGGCCAATTTCAAGCAACCTACCTGTTGCTCCAATCTCAGGACATGTTGTACCTCAGATGATGCCCTGTAGGCCGGACATTCCTTCTGTTAATTGTTGGAGACCCACTTGA 4335 0.4298 MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKIPDPKKYFVQFFGTKEIAFVAPADIQAFTSEAKNKLSARLQGKTKYFAQAVKEICAAFDEMQKQKASGLTDDTDDSRIGSEAPSNDGIVVNLKDAIDTVLSNAEQDNIDMENIDSNLEHCTPRLGQNDSQDEKHSVSDHPNESSSVSSPVIKSKLSMGSEPKKNGNKSSLKVASNVNDFGQDDNRHGGLANGTKPRKLANGLRKRSEAAGDRDRNGGSSTGIFKAENCTGRGDLSRSRETMKAGKKRKNAFDVKLDSPDTLKSDNNHNTGEKDSSMIKVKTSLEVKNELPEFSVDSKDADGKSSSLRKKMQLHATYTLGANESLHATKKLKRMDTKDDSTLGYPSKVLKRASPGSTVIEERLFKRSELKKSTPNLKTEKSLLSRGKIGGAVSDDSVHELLAATRHHIQVQKVTPDSSVIASEEKKERNYLRLKGDTSNVMIKQVERKRRAVCLFDDDDDEPKTPVHGGAGKNVKSSSVSDAKKSNNAHSEKLDVVPLTQGSSSEREDTHLKEPSSQLYNDSLSIKQPLKEKDREKDDKVIPVHIPHSPENLDLKQLPSNIAKLSSTSPLKSPQSVPASKSSAERIKASKLSLKVSNNATTQKRVDHGLSKYSHNLSSSQNQVATHKKKPALSAEISKTTPETLPQAVEVPVSTIGFKDTDALHVDRLEVSTEGKGTMKHLIAAALAKRKQAHSQFLPSGFPSVQGGTPSPTTVQPFLSVSSNFQHADMQGVYEHTSLASPPAKEHPSASHNQLDADEVEDRRVDSGQRGLGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKEEILGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKIFPESVLRGYVDDIGISNDDITVSFSLRRPSRAERAVDDPIREMEGMLVDEYGSNATFQLPGFLSSHAFEEDEDEYEDDIPIKLCKETFDASPADPTHTLGESETSNVTPNDKRHCILKDVDRELEMEDVSGHPKEERPTFFNSSDEIDLQLQVSDSNLDLTPSISKEMSATPEGSPPLPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPMLQPPPPPLPPSAPPVSLVPQSSGPARPLLSQPLMPSQSSHQSSPQLGYQQSVPHDFSGTNNGNQIVPMAGNSFPGGHNNAAVKNEIFPQPPAYAPTAGCSSQESSGFNPSRQLEYGQNDMYLNAQVPQPNHQFQQGNPPYAQRHTHPAPPQNPPNPYPYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRMPSSEYKTNNQHSVWRGRNPSCPGPPYGQEGHFQPPFERTPVTTVGFQRPISSNLPVAPISGHVVPQMMPCRPDIPSVNCWRPT* 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1080 1100 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1044 1067 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 112 131 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1129 1182 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 609 628 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1260 1278 - -
Vra2g0287 1444 SMART PWWP_4 18 75 IPR000313 -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1080 1095 - -
Vra2g0287 1444 Gene3D - 824 969 IPR008942 -
Vra2g0287 1444 ProSiteProfiles CID domain profile. 825 970 IPR006569 -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 277 321 - -
Vra2g0287 1444 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1444 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1294 1330 - -
Vra2g0287 1444 PANTHER PROTEIN HUA2-LIKE 1 1 1444 - -
Vra2g0287 1444 Gene3D - 10 114 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1050 1064 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1188 1232 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 186 227 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 571 589 - -
Vra2g0287 1444 SMART 558neu5 832 967 IPR006569 -
Vra2g0287 1444 CDD HDGF_related 18 103 IPR035496 -
Vra2g0287 1444 Pfam PWWP domain 21 104 IPR000313 -
Vra2g0287 1444 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 164 321 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 171 185 - -
Vra2g0287 1444 Pfam CID domain 832 959 IPR006569 -
Vra2g0287 1444 SUPERFAMILY Tudor/PWWP/MBT 15 111 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1258 1278 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1115 1232 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 782 823 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 795 812 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 501 602 - -
Vra2g0287 1444 MobiDBLite consensus disorder prediction 1308 1325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0287 Vra-Chr2 2166546 2180775 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0287 - - gmx:100810034 1728.38