Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0278 ATGGAGATAAATTTGGGGAAACTTGCATTTGACGTTGATTTTCATCCGTCAGATAACCTTGTCGCCACGGGTCTAATTAACGGGGACCTTCACCTATACCGTTATAGCCCTGATAGTGTCCCTGTGAGGCAATTGGAAGTTCATGCACACACAGAGTCTTGCAGGGCTGCTCGATTCATCAATGGTGGACGTGTGCTGTTGACGGGTTCTCCAGATTGCTCTATACTGGCTACGGATGTGGAGACCGGATCTACAATTACCCGTATTGATAATGCTCACGAGGCTGCAGTAAATAGATTGATAAACTTGACCGAGTCAACTGTTGCCTCAGGAGACGATGAGGGCTGTATAAAGGTTTGGGATACCAGAGAACGCTCTTGCTGCAATTCTTTTGATGCCCATGAAGATTACATTTCAGACATGACTTTTGCTTCTGATGCAATGAAACTGTTGACAACAAGTGGAGACGGGACTCTGTCTGTTTGCAATCTTCGAAGAAATACAGTACAAACTCGATCCGAATTTTCCGAAGATGAGTTGCTGTCTGTTGTTTTAATGAAGAATGGTAGGAAAGTTGTGTGCGGATCTCAAACTGGAATCATTCTGTTGTATTCATGGGGATGCTTCAAGGATTGTAGCGATCGATTTACTGAACTCTCTTCAAACTCTATTGATGCAATGTTGAAGCTTGATGAAGATAGAATTATTACTGGATCAGAGAATGGGATTATCAATTTGGTTGGGATATTACCCAACAGGGTCATCCAGCCAATAGCTGAACACTCAGAGTATCCTGTTGAGTGTCTCGCATTCTCTCATGATAGGAAGTTCCTTGGAAGCATCGCACATGATCAAATATTAAAGTTATGGGATTTGGATAGTATACTCCAAGATACAAAAAACGCACAAACTAATGAAACTGGAACTATTGATAGTGACGATGATGAAATGGAACTGGATAATGATCCTTCAAAGCTCAGTAGAGGGAACAAGAGGAAGAATGCAAATAATGGGCAAGCCCCAGGTGGTGCCAACAACTTCTTCGCCGATTTATAG 1056 0.4242 MEINLGKLAFDVDFHPSDNLVATGLINGDLHLYRYSPDSVPVRQLEVHAHTESCRAARFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAVNRLINLTESTVASGDDEGCIKVWDTRERSCCNSFDAHEDYISDMTFASDAMKLLTTSGDGTLSVCNLRRNTVQTRSEFSEDELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFTELSSNSIDAMLKLDEDRIITGSENGIINLVGILPNRVIQPIAEHSEYPVECLAFSHDRKFLGSIAHDQILKLWDLDSILQDTKNAQTNETGTIDSDDDEMELDNDPSKLSRGNKRKNANNGQAPGGANNFFADL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0278 351 Gene3D - 133 313 IPR015943 GO:0005515
Vra2g0278 351 Gene3D - 7 132 IPR015943 GO:0005515
Vra2g0278 351 SUPERFAMILY WD40 repeat-like 10 294 IPR036322 GO:0005515
Vra2g0278 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 294 IPR001680 GO:0005515
Vra2g0278 351 MobiDBLite consensus disorder prediction 303 351 - -
Vra2g0278 351 PIRSF WD_rpt_55 1 351 IPR017422 -
Vra2g0278 351 PANTHER WD REPEAT-CONTAINING PROTEIN 55 8 337 - -
Vra2g0278 351 Pfam WD domain, G-beta repeat 260 291 IPR001680 GO:0005515
Vra2g0278 351 PANTHER WD REPEAT-CONTAINING PROTEIN 55 8 337 - -
Vra2g0278 351 SMART WD40_4 168 205 IPR001680 GO:0005515
Vra2g0278 351 SMART WD40_4 82 121 IPR001680 GO:0005515
Vra2g0278 351 SMART WD40_4 1 34 IPR001680 GO:0005515
Vra2g0278 351 SMART WD40_4 251 291 IPR001680 GO:0005515
Vra2g0278 351 SMART WD40_4 124 163 IPR001680 GO:0005515
Vra2g0278 351 SMART WD40_4 38 79 IPR001680 GO:0005515
Vra2g0278 351 ProSitePatterns Trp-Asp (WD) repeats signature. 278 292 IPR019775 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0278 K24750 - gmx:100792826 626.32