Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0277 ATGGAGGGAAAAGGTACAGGAACCGCCACAGGCTGTTACAAGTGCGGCAGACCAGGTCACTGGTCACGAGACTGTCCTTTCTCTGCTCCCAATTCCAATCCAAACCCTAACGCCTCCACCAAGCCCACTTCCGATCCTACTTCATCTTCTTTCAAGCCCAGATCCGCCGCCGAAAAACCCAAGAAACTTCCCCGAACAAGGCCCAAACTAACACCGGAGATGCTTCTCTCCGACGACGGCCTCGGTTACGTCCTTCGCTATTTCCCTCGCCAGTTCAAATACCGTGGTCGCGGCCACGAGGTTCGTGACTTGGGTAATCTGCTTCAGTTGTACACTGAATGGCACTCTCACTTGCTTCCTTATTACTCTTTCAATGAGTTTATTCATAAAGTGGAGAAAGTTGCCGCTACCAGGCGTGTCAAGACTACCCTTTTAGAATTGAGAGAAAGAGTTGCAAATGGTGGAGATCCAACAAAACTGCGCGAACCACCAGTTGTGGATGACATTTCAATTGATGAACAGGGATTTGCTGGATCTGCTGAAGATGGGGGTGCAACTCATCAAGAGACAGATGTGTTTGCAGATTCTGTGAATGTTACTGACATTCAGGAAGAAATGCTTAATGATATATATGATAGGGCTACCGAACAACCTTCTCAGTCAACGGACAATGTGATTGGCATCAGCATGGCTTCAGAAAGTAACTCAACCGAAAAGACAGCAGAGAAAGTCCAAAATAATGGAACAGGCCAGTCGGGCAAAGCCGAGATAACAGAAGAGCAGAGAGCTCGTATGGAAGCAAATAGGTTAAAGGCACTTCAAAGGCGTGCTGCTCGAGCTGCCTCATCACAGGCCCCCTAA 861 0.4832 MEGKGTGTATGCYKCGRPGHWSRDCPFSAPNSNPNPNASTKPTSDPTSSSFKPRSAAEKPKKLPRTRPKLTPEMLLSDDGLGYVLRYFPRQFKYRGRGHEVRDLGNLLQLYTEWHSHLLPYYSFNEFIHKVEKVAATRRVKTTLLELRERVANGGDPTKLREPPVVDDISIDEQGFAGSAEDGGATHQETDVFADSVNVTDIQEEMLNDIYDRATEQPSQSTDNVIGISMASESNSTEKTAEKVQNNGTGQSGKAEITEEQRARMEANRLKALQRRAARAASSQAP* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0277 286 MobiDBLite consensus disorder prediction 231 263 - -
Vra2g0277 286 MobiDBLite consensus disorder prediction 24 72 - -
Vra2g0277 286 PANTHER TIMELESS-INTERACTING PROTEIN 8 283 - -
Vra2g0277 286 Coils Coil 255 275 - -
Vra2g0277 286 Gene3D - 8 68 - -
Vra2g0277 286 SUPERFAMILY Retrovirus zinc finger-like domains 7 28 IPR036875 GO:0003676|GO:0008270
Vra2g0277 286 Pfam Replication Fork Protection Component Swi3 69 150 IPR012923 GO:0005634|GO:0006974|GO:0048478
Vra2g0277 286 ProSiteProfiles Zinc finger CCHC-type profile. 12 26 IPR001878 GO:0003676|GO:0008270
Vra2g0277 286 Pfam Zinc knuckle 11 26 IPR001878 GO:0003676|GO:0008270
Vra2g0277 286 PANTHER TIMELESS INTERACTING-RELATED 8 283 IPR040038 GO:0000076
Vra2g0277 286 MobiDBLite consensus disorder prediction 26 54 - -
Vra2g0277 286 SMART c2hcfinal6 11 27 IPR001878 GO:0003676|GO:0008270
Vra2g0277 286 MobiDBLite consensus disorder prediction 231 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0277 Vra-Chr2 2084008 2087486 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0277 K10904 - gmx:100808422 413.305