Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0269 ATGGTCCAACCGGCGATGACGCAGTTCCTCAACTCCGTTCTCTCTCAGCGCGGCCCCTCCGCCGTCCCTTACTCCGAGGACACCAAGTGGCTCATCCGCCAGCACCTGGTCGCGCTAACATCTACCTTCCCTTCGCTCGAGCCCAAAACGGCCGCCTTCACGCACAACGACGGTCGTTCCGTCAACCTCCTTCAGGCCGACGGCACCATCCCCATGACGTTTCAAGGTGTCACCTACAACATCCCCGTCGTCATCTGGCTCATGGAGTCCTACCCCCGTCATCCGCCCTGCGTCTATGTGAATCCCACGCGCGACATGATCATCAAACGCCCCCACCCCCATGTTAACCCTTCTGGTTTGGTTTCCGTTCCTTACTTGCAGAATTGGACCTACCCTAGTTCCAACCTTGTCGATCTCGTTCTCAATCTCAGCCACCACTTCGGTCGCGACCCTCCCCTCTATTCCCAACGCAGACCTAACCCTAACCCTAACCCAAATCCCAACCCCAATCCTAATCCAAATCCTCACCCTCACCCCCATCCCAGTTTCGGAAACTCTTCCTCTAATTTATCTTCTAACTCTTCTTCATCTGGCTACCCCCACGCTCAACCCCCCTCTAGGCCTTACCCTCCTTCCCCTTACCCTGCTCCCGCTTCTAGGGTTCAGTCCACTGAGGATCCTTCTGAGGTTTTCAAGCGGAACGCGATTAACAAGCTTGTGGAGATGGTTCATGGGGATGTTTCCGCGTTGAGGAAGACCAGGGAGGGTGAGATGGAGGGGCTGTTTAATTTGCAGGGCGTGTTAAAGCAGCGGGAGGAGACTCTCAACAAGGGGTTGAAGGAGATGCAGGAGGAGATGGAGGCGCTGGAGCAGCAGTTGCAGATTGTGTTGATGAACACTGATGTTTTGGAGGGGTGGTTGAGGGATAACCAGGGGAAGAAGCTGGGTGGTTTGGACAATCCTGAGGATGCTTTTGAGTGTGCGGATGTACTGTCCAAGCAGATGCTTGACTGCACTGCTGCTGATTTGGCTATCGAGGACACGCTCTATGCGTTGGATAAGTCTCTTCAAGTGGGAGCTGTCCCGTTTGATCAATATTTGAGGAGTGTGAGGGCGCTATCCAGGGAACAGTTCTTTCACCGCGCCACCACGGCGAAAGTTAGAGCGGCCCAGTTGCAAGCTCAGGTTGCCAATATGGCTGCTCGGAATCACCATTATGGTAGCTGA 1227 0.5469 MVQPAMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTSTFPSLEPKTAAFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWTYPSSNLVDLVLNLSHHFGRDPPLYSQRRPNPNPNPNPNPNPNPNPHPHPHPSFGNSSSNLSSNSSSSGYPHAQPPSRPYPPSPYPAPASRVQSTEDPSEVFKRNAINKLVEMVHGDVSALRKTREGEMEGLFNLQGVLKQREETLNKGLKEMQEEMEALEQQLQIVLMNTDVLEGWLRDNQGKKLGGLDNPEDAFECADVLSKQMLDCTAADLAIEDTLYALDKSLQVGAVPFDQYLRSVRALSREQFFHRATTAKVRAAQLQAQVANMAARNHHYGS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0269 408 ProSiteProfiles Steadiness box (SB) domain profile. 329 397 IPR017916 -
Vra2g0269 408 SUPERFAMILY UBC-like 15 153 IPR016135 -
Vra2g0269 408 MobiDBLite consensus disorder prediction 181 202 - -
Vra2g0269 408 Gene3D Ubiquitin Conjugating Enzyme 1 154 IPR016135 -
Vra2g0269 408 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 6 403 - -
Vra2g0269 408 MobiDBLite consensus disorder prediction 156 180 - -
Vra2g0269 408 MobiDBLite consensus disorder prediction 203 217 - -
Vra2g0269 408 SUPERFAMILY Endosomal sorting complex assembly domain 329 389 IPR037202 -
Vra2g0269 408 Pfam Vps23 core domain 323 386 IPR017916 -
Vra2g0269 408 Gene3D - 330 390 - -
Vra2g0269 408 PANTHER PROTEIN ELC 6 403 - -
Vra2g0269 408 ProSiteProfiles UEV domain profile. 13 157 IPR008883 GO:0015031|GO:0036211
Vra2g0269 408 MobiDBLite consensus disorder prediction 150 228 - -
Vra2g0269 408 Pfam UEV domain 33 153 IPR008883 GO:0015031|GO:0036211
Vra2g0269 408 Coils Coil 272 299 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0269 K12183 - gmx:100778834 657.136