Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0263 ATGCAGGTTTTTCCTCGGCGCCAAGGAGCACTTTTGTGCTTCTGGTTGTCTGTGTTATTTCTGGTAGTAGGCTTCTGCTATGGCGACCACACTACAGTCCAGGTAGTTGGACTCGGAGAATGCACAGACTGCAATGCTAAGAATATTAAAACTAGCCAGGCTTTCTCAGGACTACGTGCAACAGTAGAGTGCAAAGCAGCAAGTGGGGACTTTGAAAGAAGAGGGGTTGGTGAGCTTGACGAAAATGGAAACTTCAAAGTGTCCCTTCCACATGACATTGTGAAAGCTGATGAACTCAAAGAAGAATGCTATGTTCAGTTACTCAGTGCATCAGCTGCTCCTTGTCCTTCCCATGATGGCCCTTTTAGCACCAAAATTGTTATCAAGTCAAAAGGTGTCGATAAACACATACTTGGTCCTGCTGGAAAACTCAAGTTTTCTTCAGAGACATGCGCTTCTGCTTTCTTCTGGAAGCACCACCCTCTCATTCCTAAGCTTCCTCCTCATCCACCCATCACCATCCCTCCAATAGTATTTCCACCGCTTCCACCAAAGATTTTCCATAAACATCCTCCACCTGTGTATACTCCTCCGCCTGTATATACTCCTCCACCTGTATATACTCCTCCTCCTGTTGAACCTTCTCCTCCTCCTAAGCCTCCACCCAAGGAGCCTCCAAAACCACCAAAACCATCCCCCCCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCCTCATCCAAAACCACCAAAACCATGTCCCCCAAAGGAGCCTCCTCACCCAAAACCACCAAAGCCTCATCCAAAACCACCAAAACCAAGTCCCCCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCCATGCCCTCCAAAGGTTAAGCCTCCTCCTCTTCCACCAAAACCACCAAAGCCACCACAGGTCAAGCCTCCTGTTCCACCACCCGTTAAGCCTCTCCCCCCACCGGTTCCAAAGAAGCCATACCCACCAAAGCATCCACTTCTTCCTCCACTCAAGCCACATCCACATCCACTTCTTCCTCCACTCAAGCCACACCCACTTCCTCCACTCAAGCCACTTCCACCTCTTCCCAAAATTCCTCCAAAGCACTTTTTCCATCACCCCAAATGGCCTCCGGTTCCACCATCTTCTTCTCATCCTTAG 1161 0.4927 MQVFPRRQGALLCFWLSVLFLVVGFCYGDHTTVQVVGLGECTDCNAKNIKTSQAFSGLRATVECKAASGDFERRGVGELDENGNFKVSLPHDIVKADELKEECYVQLLSASAAPCPSHDGPFSTKIVIKSKGVDKHILGPAGKLKFSSETCASAFFWKHHPLIPKLPPHPPITIPPIVFPPLPPKIFHKHPPPVYTPPPVYTPPPVYTPPPVEPSPPPKPPPKEPPKPPKPSPPKEPPHPKPPKPHPKPPKPCPPKEPPHPKPPKPHPKPPKPSPPKEPPHPKPPKPCPPKVKPPPLPPKPPKPPQVKPPVPPPVKPLPPPVPKKPYPPKHPLLPPLKPHPHPLLPPLKPHPLPPLKPLPPLPKIPPKHFFHHPKWPPVPPSSSHP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0263 386 PRINTS Small proline-rich protein signature 210 222 - -
Vra2g0263 386 PRINTS Small proline-rich protein signature 237 246 - -
Vra2g0263 386 PRINTS Small proline-rich protein signature 247 253 - -
Vra2g0263 386 PRINTS Small proline-rich protein signature 282 290 - -
Vra2g0263 386 PRINTS Small proline-rich protein signature 315 324 - -
Vra2g0263 386 Pfam Pollen protein Ole e 1 like 35 116 - -
Vra2g0263 386 MobiDBLite consensus disorder prediction 209 236 - -
Vra2g0263 386 MobiDBLite consensus disorder prediction 250 264 - -
Vra2g0263 386 MobiDBLite consensus disorder prediction 209 386 - -
Vra2g0263 386 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 227 - -
Vra2g0263 386 MobiDBLite consensus disorder prediction 277 386 - -
Vra2g0263 386 PRINTS Proline rich extensin signature 163 184 - -
Vra2g0263 386 PRINTS Proline rich extensin signature 186 202 - -
Vra2g0263 386 PRINTS Proline rich extensin signature 208 225 - -
Vra2g0263 386 PRINTS Proline rich extensin signature 227 252 - -
Vra2g0263 386 PANTHER PROLINE-RICH PROTEIN 2 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0263 Vra-Chr2 2002622 2004529 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0263 - - ccaj:109788544 290.041