Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0259 ATGAGACCTCAGCGAACGTCGATCTACGCCGTCACATCATGGGTGAGGCGACAACCCCCAAAGGTAAAGGCTTTTCTCGCCGTCGTTTCCGGTATGGCGGCTCTCGTCCTCCTCCGCTTCATCGTCCACGATCACGACAATCTCTTTGTTGCTGCCGAGGCTGTCCACTCTCTGGGAATTTCCGTCCTCATCTATAAGCTCACGAAGGAGAAGACTTGTGCTGGGTTATCGCTCAAATCCCAAGAATTAACAGCTATATTTTTAGCTGTTAGGCTTTACTGCAGTTTTGTCATGGAATATGATATCCACACCATACTTGATTTCGCTACTTTCATAACAACACTGTGGGTTATATATATGATTCGTTTTAAGCTGAAGGCTAGTTACATGGAGGAGAAGGATAACTTTGCAATATACTATGTGGTGGTCCCCTGTGCTGTGTTAGCATTGCTTATTCATCCATCAACTTCTCATCATTTAATAAACAGGATTTCCTGGGCATTCTGCGTATATCTGGAAGCTGTCTCAGTCCTGCCCCAGCTGCGGGTCATGCAGAACACCAAGATTGTTGAGCCATTCACAGCCCATTACGTATTTGCACTGGGTGTCGCAAGATTCTTGAGCTGTGCACATTGGGTTCTTCAGGTATTAGATAGCCGTGGGCATTTGTTGGTAGCCTTGGGGTATGGTTTATGGCCATCAATGGTTCTTATCTCAGAAATTGTCCAGACCTTCATCCTGGCAGATTTCTGTTACTATTATGTCAAAAGTGTTTTCGGGGGACAGCTTGTTCTACGTCTTCCCTCTGGAGTGGTGTGA 819 0.4603 MRPQRTSIYAVTSWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLTKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDFATFITTLWVIYMIRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPSTSHHLINRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0259 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra2g0259 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra2g0259 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra2g0259 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra2g0259 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra2g0259 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra2g0259 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-RELATED 4 271 - -
Vra2g0259 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 4 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0259 Vra-Chr2 1980871 1984094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0259 5 272 Miscellaneous Gene Families AT2G21190 87.687 5.49e-179 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0259 - - gmx:100803652 533.872