Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0253 ATGGGGAGCGTTTCGTCTGAAGACGGTTCCGACCAGCAGAGCGACCGCTGCGGCAGCTACAGCCTCAGCGCTGACGTCAGCGAGTCCGAGAGCTGCGGAAGCTTCTCTGCTCGCCGCTTCGACGCCGAGGGAGCTTCCAGCTCGGCCAACCTCTCGCCGCGTCCCGTCGCGTCTCACTTCAACTTCCCGCCTCCGCAGGTAATGCTTCCCGTTATTGGCGGGAAGGACGTCGTTGTTTGGGATCACAAGCGCGACCTCGATCTGTCGGAAGTGGAAATGATGAAGGAGCGGTTCGCTAAGCTGCTTCTCGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTGTGCACTGCGCTTGCTATCTCCAATGCTATAACTAATCTCTCTGCAACTGTGTTTGGCGAACTGTGGAGGTTGGAACCGCTGGCACCGCAGAAGAAGGCAATGTGGCGTAGGGAAATGGAGTGGCTGCTGTGTGTTAGTGATTCCATCGTGGAGCTGGTGCCATCTGTGCAGCAGTTTCCTGGGGGTGGAACCTACGAGGTGATGGCGACGCGTCCTCGCTCGGATTTGTACATCAATCTTCCGGCTCTGAAGAAGCTTGATGGGATGCTGCTCGGTATGCTTGATGGGTTTCATGACACGCAATTTTGGTATGTTGACCGGGGAATCATATTGGGTGATTCCAAGGATTGTGATGCTTACGGTAGACCATCGGTTAGGCAGGAGGAGAAATGGTGGCTTCCCTCTCCCAAGTTACCCCCAAATGGCTTGTCCGAGGAAAATAGGAAAAGGTTACAGCAATGCAGGGATTGCACTAATCAGATACTAAAAGCTGCCGTCGCAATTAATACTTCTGTGATTGCTGAAATGGAAATTCCCGGCGCATATGTAGAGTCCTTGCCCAAGAATGGCAAGGCTTGTCTGGGGGATATAATTTATCGATACATAACGGCAGACCAGTTCTCGCCTGAATGTCTCCTTGATTGTTTGGATCTTTCGTCAGAGCATCATACTCTGGATATAGCTAATAGAATTGAGGCTGCCATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAATTCAGCAAAAGCCAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACAGTGAAAAGAACAAGAATCATTTTCTTGCACAACGGGCAGAAACACTTCTAGAAAGCTTGAAACACCGATTTCCAGGGCTCCCTCAGACTGCACTCGACATGGCCAAAATTCAATATAATAAGGATGTCGGACAGTCTATTCTTGAAAGTTATTCACGAGTGATGGAGAGCTTGGCCTTTAACATTATGGCCAGGATTGATGATGTCCTTTATGTAGATGATAGTATAAAGCGATGTGCGGCTGCAGATTCTCTCTCATTGTTCAGCAGGGGAGGTTTTGGTGGCATGCCCATCCAGAAGAGATTCTCTCCTAGTCCCTTCTCAATTCAGCACACTCCATATGCCTCCCCATTTGCAACACCAACGTTTTGTTCCTCCTCTCCTGTTACTGGGAGCCCGTGTAGTCCTGCAAGGATACATGATATGAAGAGAAATGCTCCTAAGGAGGGTGCAGATTCGAAGGCAGACAAGTTGGCCAAATCTGAGTTTGAGAGAGTTTGGTCATATGCCGGAAACCTCAGTGCAAGAAGAGCTTCCGGTGATGCTCCAGAAAGAGACTAA 1701 0.5003 MGSVSSEDGSDQQSDRCGSYSLSADVSESESCGSFSARRFDAEGASSSANLSPRPVASHFNFPPPQVMLPVIGGKDVVVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLGMLDGFHDTQFWYVDRGIILGDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEENRKRLQQCRDCTNQILKAAVAINTSVIAEMEIPGAYVESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTLDIANRIEAAIHVWRLKDHKKHLNSAKARRSWGGKVKGLVADSEKNKNHFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSSSPVTGSPCSPARIHDMKRNAPKEGADSKADKLAKSEFERVWSYAGNLSARRASGDAPERD* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0253 566 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 89 457 IPR005512 GO:0005085
Vra2g0253 566 Gene3D PRONE domain, subdomain 1 324 463 - -
Vra2g0253 566 Gene3D PRONE domain, subdomain 1 81 323 - -
Vra2g0253 566 ProSiteProfiles PRONE domain profile. 81 463 IPR005512 GO:0005085
Vra2g0253 566 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 2 566 - -
Vra2g0253 566 MobiDBLite consensus disorder prediction 1 28 - -
Vra2g0253 566 MobiDBLite consensus disorder prediction 521 537 - -
Vra2g0253 566 MobiDBLite consensus disorder prediction 514 537 - -
Vra2g0253 566 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 2 566 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0253 Vra-Chr2 1962231 1965487 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0253 - - gmx:100819455 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0253 2 1962231 1965487 Vra2g0253 2 1962231 1965487 ECH