Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0252 ATGAAGCTCATGAATAAACCATCACAGCTACGTGCTTTGTCCTGTTTCTGTTCCATTCTGCTGCTTTTGGAATTCGTTTTCGTTGCTGCGGAAGACCCTTATAGATTCTTCGACTGGACTGTCACCTACGGTGACATTTATCCTCTGGGAGTTAAACAGCAGGGTATTTTGATCAATGGCCAATTCCCAGGCCCTGAAATCTACTCTGTTACCAATGACAATTTGATCATCAACGTACGCAATAACTTGACCGAGCCGTTTCTTTTATCATGGAATGGTGTTCAACAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACGACATGCCCCATCCCTCCAGGGCAGAACTTCACCTACACACTTCAAGTCAAAGATCAGATTGGAAGTTTCTTCTATTTCCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGTTTTGGTGCAATCAAAATCCTTAGCAGACCAAGAATCCCTGTCCCATTTCCTGAACCAGCTGCTGATTACAGTCTTCTTATTGGTGATTGGTACCAAATCAATCACAAGAAACTTCAAGGTGTTCTAGATTTTGGACATAGACTTCCATTGCCTCAAGCTGTTCTTATCAACGGTCGTCCAAACGGCACAACATTCACAATCGAACAAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGACTTGAAAACACTCTCAACTTTAGGATTGAAGGCCACAGCATGAAGTTGGTGGAAGTTGAGGGAACTCATACCATCCAAACCAAGTATTCCTCGTTAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTATCACAGCTGATCAAGCGCCCAAGGACTACTACATTGCAGTGTCCACTCGTTTCACTGACAAAATCATCACGAGCACTGCCATTCTTCACTACAGTAACTCCCAACAATCTGTTTCTGGCACAATCCCTGGTGGCCCAACCGATCAGATCAATTGGTCCATCGAACAAGCTCGTTCGATCAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCTCAAGGCTCCTACCATTACGGTTTGATTAACATCAGTAGGACAATTATATTGTCGAGCTCAGCGGCACAAGTCAATAAGAAACAGAGATATGCAGTGAACAGTGTGTCGTTCGTACCAGCCGACACTCCTTTGAAGCTCGCCGATTACTTCAAGATTGATGGGGTTTTCAAAGTTGGAAGCATTCCCGATACCCCTTCTCGTAAACCCATGTATCTTGACACCTCAGTCATGGGTGCTGATTTTCGAGCCTTCGTTGAGATCGTGTTTCAGAACAACGAGAACATTGTCCAGAGCTGGCACATTGACGGATACTCCTTCTGGGTTGTAGGAATGGATGGTGGTGTTTGGACACCTCAAAGTCGAAACGAGTACAACCTCAGAGATGCAGTGTCAAGGAGCACAACACAGGTGTATCCCAAATCATGGACTGCAATTTACATAGCACTGGATAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCAAGACGATACCTCGGACAACAATTTTATCTGCGAGTGTATTCACCAGTTGGATCCATCAGGGATGAATACCCAATTCCCAAAAATGCTCTTCTTTGTGGCAAAGCAGCAGGAAGAACAAGTAGATGA 1641 0.443 MKLMNKPSQLRALSCFCSILLLLEFVFVAAEDPYRFFDWTVTYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVRNNLTEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGQNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPEPAADYSLLIGDWYQINHKKLQGVLDFGHRLPLPQAVLINGRPNGTTFTIEQGKTYRLRISNVGLENTLNFRIEGHSMKLVEVEGTHTIQTKYSSLDVHVGQSYSVLITADQAPKDYYIAVSTRFTDKIITSTAILHYSNSQQSVSGTIPGGPTDQINWSIEQARSIRTNLTASGPRPNPQGSYHYGLINISRTIILSSSAAQVNKKQRYAVNSVSFVPADTPLKLADYFKIDGVFKVGSIPDTPSRKPMYLDTSVMGADFRAFVEIVFQNNENIVQSWHIDGYSFWVVGMDGGVWTPQSRNEYNLRDAVSRSTTQVYPKSWTAIYIALDNVGMWNVRSEFWARRYLGQQFYLRVYSPVGSIRDEYPIPKNALLCGKAAGRTSR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0252 546 CDD CuRO_1_AAO_like_1 36 151 IPR034273 GO:0005507
Vra2g0252 546 Pfam Multicopper oxidase 167 302 IPR001117 -
Vra2g0252 546 SUPERFAMILY Cupredoxins 27 181 IPR008972 -
Vra2g0252 546 Gene3D - 34 155 IPR008972 -
Vra2g0252 546 PANTHER MULTI-COPPER OXIDASE 15 541 IPR045087 -
Vra2g0252 546 CDD CuRO_3_AAO_like_1 381 502 IPR034275 GO:0005507
Vra2g0252 546 Pfam Multicopper oxidase 41 154 IPR011707 GO:0005507
Vra2g0252 546 Pfam Multicopper oxidase 384 519 IPR011706 GO:0005507|GO:0016491
Vra2g0252 546 SUPERFAMILY Cupredoxins 161 340 IPR008972 -
Vra2g0252 546 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Vra2g0252 546 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 15 541 - -
Vra2g0252 546 Gene3D - 165 338 IPR008972 -
Vra2g0252 546 Gene3D - 349 544 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0252 Vra-Chr2 1956325 1959933 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0252 - - gmx:100818914 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0252 2 1956325 1959933 Vra2g0252 2 1956325 1959933 ECH