Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0248 ATGGGAGAAGCAGCTGAAGCTCAATACTTCAGATCAGAAATAGCTCTTCTGAATTACTCAGATGCCAGTTTGAAACCTCCACTCTCTCCTCTCTTGATCCACATTGATCCACTCACACCAACTTCTTCATCTCCCTCAGAAGCTCATCCATCACCCTCTTCCCAGCTCCACCAACAGGAACAACACCCCAAAGACGCCTGGCTTCCCATCACCGAATCAAGAAATGGAAATGCCTTTTCTGCAGCCTTCCATGTTCTTAACTCCAATATCGGCTTCCAGGCTCTCATGCTTCCCGTTGCTTTCGCCACTCTTGGTTGGGTGTGGGGCACAGTATGTTTGACAGTGGCATTCATTTGGCAGCTCTATAGCATATTTCTTCTTGTTGAACTTCACGAATCCGTCCCTGGGATTCGTCACAGCAGATATCTCTTCCTCGCCATGGCTGCATTCGGTAAAAGGTTAGGGAAAGTTGCAGCATTATTCCCAGTGATGTATCTTTCAGGAGGCACATGCGTCATGCTTATCATCACCGGTGGTGGGACCCTGAAACTGTTATTCAAGACACTTTGCGAGAATGATAATGGAAACATTTGTAGTGCCCACGCGCTTACCGGGGCAGAGTGGTTCTTGGTCTTTACCTGTGCCGCCATTCTCGTTGCACAGTTGCCAAACCTCAACTCCATGGCCATGGTTTCTCTCGTCGGAGCCGTTACCGCCATCTCTTATTGCACCCTCTTCTGGGTTCTCTCCGTTAAGAAGGGTAGGCCCAACAACGTATCGTATACCTCAACCCTGTCGCAAGAATCCACTGCGGTGGGTAAGATCAGCGACGTTCTCAATGCTATCGGAATCATCGTGCTAGCCTACAGAGGTCATAATGTTTTGCTCGAGATACAGGGGACGCTGCCTTCAGATTTCGAAAGAACATCCAAAGAGCCAATGCGCAGAGGAGTGAGCATGTCATATGCTCTGATCTCCACGTGCGTCTTTCCTCTTGCAATTGCCGGATTCTGGGCCTATGGAAGCCAGATAAACGAGGGTGGATTGTTGTATTCGTTCCCGCAATTGCACAGGAAGCAGATAACGAAATTCTCTATGGGAGCAATATACGTTCTGGTGATAATTCATTGTTTGAGCAGCTACCAAATCTATGCGATGCCGGTTTTCGACAACCTTGAGATAAGATTGACGAGCATAACGAATGAGAGATGTTCGGGATTGGCGAGAACATGCATACGATTATTTTTCGGGGGATTGACGTTTTTCATAGCTGTCACATTCCCATTCCTTCCATCCCTATCAGCACTGCTCGGAAGCATAACCCTGGTGCCAATCACGTATGCATACCCCTGTTTCATGTTTCTATCACTGAAGAAGCCTCGACCAAGAGGTTTTGTTTGGTGCTTCAACGCTGCGCTCGGGTGCTTAGGGTTGCTTCTCAGTGCTCTTCTCTTAGCTGCAGCTGCAAGGACTCTGTCTCACAAAGGCTTGAATGCTAACTTTTTCAGACCATAA 1515 0.4799 MGEAAEAQYFRSEIALLNYSDASLKPPLSPLLIHIDPLTPTSSSPSEAHPSPSSQLHQQEQHPKDAWLPITESRNGNAFSAAFHVLNSNIGFQALMLPVAFATLGWVWGTVCLTVAFIWQLYSIFLLVELHESVPGIRHSRYLFLAMAAFGKRLGKVAALFPVMYLSGGTCVMLIITGGGTLKLLFKTLCENDNGNICSAHALTGAEWFLVFTCAAILVAQLPNLNSMAMVSLVGAVTAISYCTLFWVLSVKKGRPNNVSYTSTLSQESTAVGKISDVLNAIGIIVLAYRGHNVLLEIQGTLPSDFERTSKEPMRRGVSMSYALISTCVFPLAIAGFWAYGSQINEGGLLYSFPQLHRKQITKFSMGAIYVLVIIHCLSSYQIYAMPVFDNLEIRLTSITNERCSGLARTCIRLFFGGLTFFIAVTFPFLPSLSALLGSITLVPITYAYPCFMFLSLKKPRPRGFVWCFNAALGCLGLLLSALLLAAAARTLSHKGLNANFFRP* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0248 504 PANTHER OS05G0424000 PROTEIN-RELATED 60 499 - -
Vra2g0248 504 MobiDBLite consensus disorder prediction 40 61 - -
Vra2g0248 504 MobiDBLite consensus disorder prediction 40 62 - -
Vra2g0248 504 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 60 499 - -
Vra2g0248 504 Pfam Transmembrane amino acid transporter protein 75 487 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0248 Vra-Chr2 1924715 1928029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0248 57 504 Organic Solute Cotransporters AT1G47670 50.893 1.47e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0248 - - var:108339053 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0248 2 1924715 1928029 Vra2g0248 2 1924715 1928029 ECH