Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0242 ATGCAGTGCTATAAAGAAGCAGACATGGAAGAAGAGACCAAAGTCGTATCAGAGGTTCCAGGGACAAAGGCTGTTGTGGAGGCAGATCATAAGAATGACGCCATCAAGGAGACAAATGGAGGCTTGTCAAGTGAAGTAAAGAAAGAAGAGGAAGAGAATGCCTTAGATGGAGAATTCATAAAAGTTGAGAAAGAAGAGAATGCCACAGATGATAAGTCCCACAAAACTGAAAGAAGCTCGGATTCTCCGAGCAGAGAATTTCTAGAAGCTCAAGAGAAGATACGGGAACTTGATGTTGAACTCCAAAGACTAACAGAATCGTTGAAGACCTCTGAGCATGAAAACAATCACCTGAGGGGAGAGATCTCAGTTACACAACAGAAATTGGAGGAAAGTGGTAAGAAATACGAAGAGCTTGAACTGAGTCACAAGAAATTGCAAGAGCAGACAGTTGAAGCCGAGAATAAATATAATCAGCAGCTCAGCAATCTTGAAGAGGCACTTCAGAGTCAAGAAGTGAAGCAAAAGGAGCTTCTTCATGTGAAGGAAGCATTCGACGATATTAACCTTGAGCTTGAAAACTCCAGAAAGAAGATGCAGGAATTGCAGGATGAGCTGAAACTTTCAGCAGACGAGGCTCGGAAATTCGAGGAACTTCATAAGCAGAGTGGATCACATGCTGAATCCGAGGGAAAGAAGGCCTTAGAATTTGAGAGACTACTTGAAGAAGCCAAACTGACTGCAAAAGGAATGGAAGATGAGATGGCCTCCCTTAAAGAAGAACTGAAAGGTGTTTATGATAAGATTTCAGAAAATCAAAAGATTGAAGAAGCACTTAAAACAACCACAGCTGAACTTTCTACTATCCAAGAGGAGTTGACACTTTCAAAATCACAGTTGTTGGAAGTTGAGAAAAGACTGTCTTCAAGGGACTCTTTGGTGGATGACTTGACCCGGGAAGTAAACCTGATAAAGACATCAGAAACACAGCTAACGGAAGACATGTCAGCACTTCAAAATCTATTGGCCACATCGAAGGAAGAACTGCAAGAAAAAATTTCTGAATTGGAATCTGCAAGGTCCAAATTGCGCGAGGAGGAAAAATTGAGGGAATCAATTGAAGCTTCCCTCAAGAATCAAGAAACCCAGTTTCTCAATGTACAAGAGGAGCTGACTAAGCTTAAAACAGAAAATGGAACTCTTGAAGCAACCGTGGAAGATCTAACACTTAATTCGAAGAAGTTTGAGGAGTTATGCGCTGATTTAGAGGGAAAACTAAAGCTATCAGATGAAAACTTTCTCAGAACAGATTCTCTTTTATCTCAGGCGCTTTCAAACAACGCAGAGCTCGAGCTGAAGGTGAAATCACTAGAAGATCTCCATAATGAATCTGGCGCTGCTGCAGCTACTGCTACTCAAAGGAGCCTTGAACTTGAGGGACATATTCAGACTTCCGTTGAAGCTGCAGAAGTTGCAAAAGCACAATTGAGGGACCTGGAAACACGCTTCATAGCAGCAGAGCAGAAGAACGTGGAGCTTGAGCAACAACTAAACTTACTACAATTGAAAACCAGTGATGCTGACAGAGAAGTAACTGAATTGTCCGAAAAAATATCCCATCTCAATGCTAAATTGGAAGAGACCGAGAAAGAGAAGAATCTTCTTAACGACAAATTGCAAGAGTATATGGAAAAGGTCGTTCAACTTGAATCAGACTTGAATCAATCCTCTTTGCGGAGTTCAATATTGGAGGAGGAGCTGAAGAAAGTCAATGACAAATGTTCTGAGCATGAAGACCGAGCCACTATGAACCATCAGCGTAGCCGAGAACTGGAAGATTTAATCCAGAGCTCCAACTCCAAATTGGAAGATTCTGGTAAAAAGGTGAGTGAGTTGGAGTTGTTACTTGAAGCAGAGAAATACAGAATTCAGGAACTTGAACAACAAATAAGCACATTAGAAGAAAAATGCAGGGTTTCAGAAGAGCAAAACGATAAATACCTCAACGATTTGTCTAATTTAACATCAAAACTTGAGGCAATTCAGACACGAACGTCAACCCTCGAAGTTACACTGCAAGCAGCTAATGAAAGAGGAAAGGAGTTGGAAGATTCTCTGAATTCGATGACGGATGAAAAGAAGAAGTTAGAAGATGCTTCTAGCAGTTTGAATGAGAAGCTTGCTGAGAAAGAAAACCTATTGGAAATTTTGAGGGATGATTTAAATCTAACACAAGGTAAATTGCAAAGCACTGAAAGTGATCTCAGGGCTGCTGAATTCAGAGAGAGTGATATAATTGAGAAACTTAAAGCTTCTGAAGAAAATCTTGTCATAAGAGGAAGAGATATAGAGGAAACTGCTTCAAGACACTCGGAACTTCAATTGTTGCATGAGTCTCTGACGAGAGATGCAGAACAGAAACTCCAAGAAGCTATAGAAAAATTCAGCAACAAGGATTCTGAGGTTCAGTCTCTGCTTGAGAAAATTAAGATTTTGGAGGAACTGATTACACGGGGTGGGGAACAGTCTACATCCTTGAAGAATCAACTCGAAGAGAGTTTGAGTAAACTTTCTTCTTTGGAAAGTGAAAACGAAGTTTTGAAACGACAAGTTCTAGAAGCCGAGAGCAAGATTTCTCAGTCTTCTTCCCAAAATGAATTATTGGTTGGAACAAACATCGACCTGAGAACCAAGATTGATGAACTTGAGGAATCACTGAACCGTGCACTATCAGAGAAGGATGCCACTACTCAAGAACTTGTGACCCATAAGAACAGTCTAGCTGAATTGAATGATTTACAATCAAAATCCACTCAAATTCAAAGTGCAAATGAATCCCGCATTCTAGAAGTAGAATCTCAATTACAAGAAGCGTTGCAGAGGCATACTGAGAAGGAATCAGAAACCAAAGTGTTGAATGAGAAGCTGAATACACTAGAGAACCAAATAAAGCTTTTCGAAGAACAGGCACTAAATGCAGTTGTAGCTTCGGGAACTCAAAAAGATGAGCTGGAGGAGAGTCTCATAAAATTAAAGCACCTTCAAACTGTCATTGAGGAACTGCAAAACAAGTCACTCGACCATGAAAAAGAAACTTCTGGGCTAAATGATGAAAACTCAAAGCTTAATCAGGAAATAGCTATCTATGAATCCAAATTAAGTGATTTGCAGTCAAAGCTCTCTGCAGCACTTGCTGAGAAGGATGAAACAGCTAAAGAGATACTCACCTCGAAGAATGCCATCGACGAATTAGTGTCAAAGCATAGTGCAGAGGTGCAGACGCTGAATTCACAGTTATCTTCAGTGATTGATGAGAAGAACTTGCTAAATGAGACTAATCAGGATATAAAGAAGGAACTTCAGGCTTTTATACTTGACCTTGAAGAGAAGTTGAAGGAACAACAGAAAATTGAAGGCTCTCTGAGATATGAGATCGAAATTCTCAAAATGGAGATTGCTGAGAAATCTGAACTAAATGAACAGGTTGGAAGTGTTCAAGCTGCTGCTTCTCAAAGAGAAGCAGAATTAAATTCAAAACTGGTAGACTATGAACAAACACTCAATGATAGGAATGTGCTGAATGAGAAGGTTGCAGAACTTGAGAAAGAGTTGCAACTTGTACGGGATACTCTTGCTAACCAGAAAGGAGCAGAATCTCAGAAGTTGGAACTAGAGACAGCCCTGAAGAATTCTGTTGAAGAACTTGAAATTAAGAAAAAAGATATCTCTCTTCTACAGAAACAAGTGGCAGATCTAGAGCAGAAATTGCAACTGGCTAGTGATAAATCCCCAGTTAAGGGCGATGAGGGTGTTGATCAGAAAGAAGGGTTGGAAGTGAAGTCCAGGGACATTGGGTCAATCCTCTCGAGTCCATCGAAAAGGAAAAGCAAGAAAAAGTCAGAAGTATCAAGTCCTCAAACATCATCTGCGTCCGAGACTCATGTTCAAAGTGGCCAGGTTTCGTCTGTCATAAATTACAAGTTCATCTTTGGAGTAGCTATTGTGTCCATTGTCTTTGGCATAATTCTTGGGAAGCGTTACTAG 4044 0.4036 MQCYKEADMEEETKVVSEVPGTKAVVEADHKNDAIKETNGGLSSEVKKEEEENALDGEFIKVEKEENATDDKSHKTERSSDSPSREFLEAQEKIRELDVELQRLTESLKTSEHENNHLRGEISVTQQKLEESGKKYEELELSHKKLQEQTVEAENKYNQQLSNLEEALQSQEVKQKELLHVKEAFDDINLELENSRKKMQELQDELKLSADEARKFEELHKQSGSHAESEGKKALEFERLLEEAKLTAKGMEDEMASLKEELKGVYDKISENQKIEEALKTTTAELSTIQEELTLSKSQLLEVEKRLSSRDSLVDDLTREVNLIKTSETQLTEDMSALQNLLATSKEELQEKISELESARSKLREEEKLRESIEASLKNQETQFLNVQEELTKLKTENGTLEATVEDLTLNSKKFEELCADLEGKLKLSDENFLRTDSLLSQALSNNAELELKVKSLEDLHNESGAAAATATQRSLELEGHIQTSVEAAEVAKAQLRDLETRFIAAEQKNVELEQQLNLLQLKTSDADREVTELSEKISHLNAKLEETEKEKNLLNDKLQEYMEKVVQLESDLNQSSLRSSILEEELKKVNDKCSEHEDRATMNHQRSRELEDLIQSSNSKLEDSGKKVSELELLLEAEKYRIQELEQQISTLEEKCRVSEEQNDKYLNDLSNLTSKLEAIQTRTSTLEVTLQAANERGKELEDSLNSMTDEKKKLEDASSSLNEKLAEKENLLEILRDDLNLTQGKLQSTESDLRAAEFRESDIIEKLKASEENLVIRGRDIEETASRHSELQLLHESLTRDAEQKLQEAIEKFSNKDSEVQSLLEKIKILEELITRGGEQSTSLKNQLEESLSKLSSLESENEVLKRQVLEAESKISQSSSQNELLVGTNIDLRTKIDELEESLNRALSEKDATTQELVTHKNSLAELNDLQSKSTQIQSANESRILEVESQLQEALQRHTEKESETKVLNEKLNTLENQIKLFEEQALNAVVASGTQKDELEESLIKLKHLQTVIEELQNKSLDHEKETSGLNDENSKLNQEIAIYESKLSDLQSKLSAALAEKDETAKEILTSKNAIDELVSKHSAEVQTLNSQLSSVIDEKNLLNETNQDIKKELQAFILDLEEKLKEQQKIEGSLRYEIEILKMEIAEKSELNEQVGSVQAAASQREAELNSKLVDYEQTLNDRNVLNEKVAELEKELQLVRDTLANQKGAESQKLELETALKNSVEELEIKKKDISLLQKQVADLEQKLQLASDKSPVKGDEGVDQKEGLEVKSRDIGSILSSPSKRKSKKKSEVSSPQTSSASETHVQSGQVSSVINYKFIFGVAIVSIVFGIILGKRY* 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0242 1347 SUPERFAMILY Tropomyosin 441 617 - -
Vra2g0242 1347 Coils Coil 328 425 - -
Vra2g0242 1347 Coils Coil 32 52 - -
Vra2g0242 1347 MobiDBLite consensus disorder prediction 24 92 - -
Vra2g0242 1347 Coils Coil 1228 1262 - -
Vra2g0242 1347 Coils Coil 234 268 - -
Vra2g0242 1347 Coils Coil 892 919 - -
Vra2g0242 1347 MobiDBLite consensus disorder prediction 108 133 - -
Vra2g0242 1347 Coils Coil 482 600 - -
Vra2g0242 1347 Coils Coil 629 684 - -
Vra2g0242 1347 Coils Coil 948 989 - -
Vra2g0242 1347 MobiDBLite consensus disorder prediction 21 92 - -
Vra2g0242 1347 Coils Coil 87 121 - -
Vra2g0242 1347 Coils Coil 808 828 - -
Vra2g0242 1347 Coils Coil 185 219 - -
Vra2g0242 1347 Coils Coil 692 754 - -
Vra2g0242 1347 PANTHER EARLY ENDOSOME ANTIGEN 9 1347 - -
Vra2g0242 1347 Coils Coil 1099 1137 - -
Vra2g0242 1347 Coils Coil 272 292 - -
Vra2g0242 1347 Gene3D - 537 693 - -
Vra2g0242 1347 MobiDBLite consensus disorder prediction 1287 1314 - -
Vra2g0242 1347 Coils Coil 1183 1217 - -
Vra2g0242 1347 Coils Coil 440 460 - -
Vra2g0242 1347 SUPERFAMILY Tropomyosin 615 859 - -
Vra2g0242 1347 Coils Coil 843 884 - -
Vra2g0242 1347 Coils Coil 1004 1073 - -
Vra2g0242 1347 Coils Coil 129 181 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0242 - K20283 gmx:100792883 2000.33