Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0240 ATGAACACGCTCCTCCGATCCACTCTGAGGACTAAGAATGCTTCATCTCTAGCATATGCTGCTGTTTCCAGAGGTGTTCAGGAAAATCTTCTTCAGGCTCCCTTGTGGTCTAGATCAAATAGCACGGAGTCTTCCTTGAAAAGGGATGACTCAGCCAATGAAGTGAAAAGTGGTCCAGTGTTCAAGGGTCATAGTATGCTTGCTCCTTTCACGGCAGGTTGGCAGTCTACTGATTTGCATCCTCTGGTTATAGAAAAGTCAGAGGGAAGCTATGTGTATGATACTAATGGAAAGAAATATCTTGACGCACTTGCTGGTTTATGGGCCACCTCTTTAGGGGGAAGTGAGTCACGCCTTGTGGATGCTGCTGTCGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACCGTACCTTCTCTGGAACTAGCCAAGGAGCTCCTAGAAATATTCACAGCCAGAAAAATGGCAAAAGCTTTTTTTGTTAACAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCGCTTGGAAGGCCAAATAAGAAGAAGTTCATAGCTCGTGCTAAATCGTATCACGGTTCAACATTGATAGCAGCCAGTCTTTCCGGTCTTCCGGCTCTTCATCAGAAATTTGATTTACCAGCACCTTTTGTTTTGCATACTGACTGTCCACACTACTGGCGGTATCACCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTAGCCAACAATTTAGAGCAGCTGATTCTGAAAGAGGGGCCAGAGACAATAGCTGCATTTATTGCTGAACCTGTAATGGGGGCAGGAGGTGTAATACCTCCACCAGCAACTTATTTTGAGAAGGTTCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCTGATGAGGTAATCTGTGCCTTTGGAAGGCTTGGGACAATGTTTGGATGTGACAGGTACAACATTAAGCCGGACCTTGTATCCCTGGCTAAGGCATTGTCTTCTGCATATTTGCCAATTGGAGCTGTGCTCGTGAGCCCAGAAGTTTCAGATGTTATTCACGCCCAAAGTAACAAACTTGGTTCATTTTCTCATGGGTTTACTTATTCTGGACACCCCGTAACCTGTGCTGTTGCAATTGAAGCTCTCAAAATCTACAAGGAAAGAAATATTGTTGACCAAGTGAACAAGATCTCCCAAAGGTTCCAAGATGGCATAAGAACTTTTTCTGACAGTCCCATCATTGGAGAGATACGGGGAGTTGGCTTGATTTTGGGCACCGAGTTCACAGACAACAAATCACCTAATGATCCGTTTCCTTCTGAATGGGGAATAGGTGCCTATTTTGGAGCTCAATGTGAGAAGCATGGGATGTTAGTTCGTGTTGCGGGAGATAGCATCATGATGTCTCCACCATATATTATTTCTCCTGAAGAAGTTGACACGTTAATCAGTATTTATGGGAAAGCTTTGAAAGAAACGGAAAAGAAGGTGCAAGAGCTCAAGTCTCAGCGCAAGTAG 1542 0.4364 MNTLLRSTLRTKNASSLAYAAVSRGVQENLLQAPLWSRSNSTESSLKRDDSANEVKSGPVFKGHSMLAPFTAGWQSTDLHPLVIEKSEGSYVYDTNGKKYLDALAGLWATSLGGSESRLVDAAVAQLKKLPFYHSFWNRTTVPSLELAKELLEIFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEQLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDRYNIKPDLVSLAKALSSAYLPIGAVLVSPEVSDVIHAQSNKLGSFSHGFTYSGHPVTCAVAIEALKIYKERNIVDQVNKISQRFQDGIRTFSDSPIIGEIRGVGLILGTEFTDNKSPNDPFPSEWGIGAYFGAQCEKHGMLVRVAGDSIMMSPPYIISPEEVDTLISIYGKALKETEKKVQELKSQRK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0240 513 Gene3D Aspartate Aminotransferase, domain 1 82 498 IPR015422 GO:0003824
Vra2g0240 513 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 19 508 - -
Vra2g0240 513 CDD OAT_like 76 498 IPR005814 GO:0008483|GO:0030170
Vra2g0240 513 Pfam Aminotransferase class-III 80 497 IPR005814 GO:0008483|GO:0030170
Vra2g0240 513 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 19 508 - -
Vra2g0240 513 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Vra2g0240 513 Gene3D - 116 398 IPR015421 GO:0003824
Vra2g0240 513 PIRSF Transaminase_4ab_Lys_Orn 72 501 IPR005814 GO:0008483|GO:0030170
Vra2g0240 513 SUPERFAMILY PLP-dependent transferases 67 500 IPR015424 -
Vra2g0240 513 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0240 Vra-Chr2 1844785 1851524 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0240 K16871 - gmx:100792355 952.199