Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0239 ATGGTGAGAAAACATGGCTGGCAATTACCTGCTCACACTTTTCAGGTTGTTGCAATCACTGTATTTTGCTTGTTGGTGATTGCTTTCTATGCTTTTCTTGCTCCCTTCATTGGAGGTCTTATATGGGAATACATTTTCATTGGTGTTTACTCTCCTGTGGCACTCATTGTGTTCATTCTTTACGTCAGATGCACTGCAATCAACCCTGCAGATCCGGGCATTATGTCTAAGTTTGACCCCAGAGTGGGAAATAATCTCAATTCTGTTCATGAATTGTCAGGAAAACATCACATTTCGGAACATGAACGCATTGCTGCCAGAGAGCAATATTCTCCATCATCTTCCAAAAGGTCTATGACAAATATGAGCAAGAAAAGCTCGGTGGAAGATTTGGACAGGGCAGACAGTTCAAGGAAACAGAATAACCAAAGCTCATGTAATGTAGTTGGAGGAATTTTCTGCATACTATTTTCACATGAAGATTGCCGAAAACAAGAAGCATCAACTGAGGAGCAGGGTGGTGGTGAGGATGCACTGTTCTGCACTTTGTGCAATGCTGAGGTGCGCAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAATTGTGTGGGTCACAAAAATTACAGTTCTTTTATTGCTCTCATGGCTTTCAGTCTTGCTTGGCTAGCCATTGAAGCTGGAGTGGGTGTTGCGGTTTTTGTGCGTTTCTTTGTCAATAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGGCCCCCATTTGCTGCCGTTGTGGTCGTATGTACTGTAGTTTCTATCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTAATCAGGAAGGGCATTACTACTTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTGTGGATGATGAATTGCCAAATATACTTTACTCTCCAACAGGCTCAGCCACCACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAATATAAAGGAGCTTGGTGCACCCCTCCCAGGGTATTTGTTGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTACCGTCTACTGTTGATCCAGATGCAGCGGGTATTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCACAAGAGGCTGTGAGAGCAGCTGCGAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGACAGCCACCGCCTACCAGATGCAGAATTGAGCTCTAGTGGCAACATGAGCATCAGAAGTAGTTTGAGCACTGAGACTGGAACTAACAAGGAAATTAAACACGAGTTAAGATTGTCTCCGGTCCAAAATTCTATTGCTCCTAGTCAAGGAAGTCGCGATGAGTATGAGACTGGAACTCAAAGTATGAGTAGCTTCAGCAGTCCTAGCCATGTTCATGAGGCAGTTACACTCAGCCCTCTTCCACAGGGTCACAGTTTGGGTGGCTTCAGGTCAGGTGCCTCAATCCCTAGTTTGGTGGTGCCTGAACGTCCTTTAACTTCTAAAGCAACATTGTCAAACTTCAGGAACCCAATATCTAATCCATCTCTTGGATTTGACGGGAGGACAACAATGCCAAAAGGAATTGGCCATGATCCATTGTTGCTTTCTGCTTCTAACACTTCTATTCTAAGAGATGTGAAACGGTCATCAGTTGTTTGGGATCAAGAAGCTGGCAGATACGTTTCAGTCCCTTTATTGCCGTCAGAAGCCCGAAACAGGTCATCCATGCGCGTAGAATTGCAAAATGTAAATGCTGAAACAAGCAGTTTTGGGAAAAAACCAGTGATTCCGCAGCAGGAGTTGTCATCATCTGCACCCAAGTCTCCAGGGCAGCACATACAGAATCTGATGTATACAGGAGATTCTATCTTTTATGGGGGTCCATTTTTGAGTGCCCCTGTTAAAGATGGTTTGAAAAATGAAAGACTTTTGGCATCAGGGGAGGCGCAAGATAACATATCAGCGAACTTGCCCCTAGAGCCAAGATATAAAAGGGGCTCTCTTTCAAATCAGCTTCCTGTGTTTGTCCCTGGTGGATTTGAGAATAACCTTCAACCTCGTTCAGGCATGAATTAA 2211 0.4419 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGLIWEYIFIGVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVGNNLNSVHELSGKHHISEHERIAAREQYSPSSSKRSMTNMSKKSSVEDLDRADSSRKQNNQSSCNVVGGIFCILFSHEDCRKQEASTEEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGHKNYSSFIALMAFSLAWLAIEAGVGVAVFVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVVCTVVSILACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASVDDELPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDSHRLPDAELSSSGNMSIRSSLSTETGTNKEIKHELRLSPVQNSIAPSQGSRDEYETGTQSMSSFSSPSHVHEAVTLSPLPQGHSLGGFRSGASIPSLVVPERPLTSKATLSNFRNPISNPSLGFDGRTTMPKGIGHDPLLLSASNTSILRDVKRSSVVWDQEAGRYVSVPLLPSEARNRSSMRVELQNVNAETSSFGKKPVIPQQELSSSAPKSPGQHIQNLMYTGDSIFYGGPFLSAPVKDGLKNERLLASGEAQDNISANLPLEPRYKRGSLSNQLPVFVPGGFENNLQPRSGMN* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0239 736 MobiDBLite consensus disorder prediction 428 508 - -
Vra2g0239 736 MobiDBLite consensus disorder prediction 108 125 - -
Vra2g0239 736 Pfam DHHC palmitoyltransferase 178 313 IPR001594 GO:0016409
Vra2g0239 736 MobiDBLite consensus disorder prediction 107 143 - -
Vra2g0239 736 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 9 536 - -
Vra2g0239 736 ProSiteProfiles DHHC domain profile. 179 229 - -
Vra2g0239 736 MobiDBLite consensus disorder prediction 479 508 - -
Vra2g0239 736 MobiDBLite consensus disorder prediction 637 657 - -
Vra2g0239 736 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 536 - -
Vra2g0239 736 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0239 Vra-Chr2 1832517 1839565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0239 180 310 Lipid Metabolism Gene Families AT4G22750 28.244 3.01e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0239 K20027 - gmx:100805779 1293.49