Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0218 ATGGCGATCGCTTTCTCCTTCTTCACTGCGCCCACTTCATCTTCATCTTCATTCTCTTCTTCCAAAGCCGTTCCTTCTCTTTCCCTTTCTTCCTCCCTCAGCATCCGCATCCCGCGCCGGGCGGATCGCTTTTTCCCTCTCCGCTCCACAATAGGAGCTTCTGTTGGCGGATCCTTCGGAGGACACGGTGGCGGACATGGTGGTCACGGACATGGCGGTGGTGGCGGCGGCGGTGACGACGAGCACGCCAATGAGGGAAGGAACGAGGCCTTGATGGTCGTGGCGGAGGCGGGGAGGGCGTTGGAGAGCGTGCCGGCGGATTTGGCGGCGGCGATAAAGGAGGGAAAGATTCCGGCGGCGGTTGTGACGCGGTTTTTGGAGCTGGAGAAGTCCGCGTTCTTCCGGTGGCTGCTTCAGTTTCCTGGTTTCAGAGAGCGCCTCCTCGCTGATGATCTCTTCCTCGCGAAAGTCGCCATGGAATGCGGCGTTGGCGTCTTCACCAAGACTGCTGCTGAGTACGATCGAAGAAGAGAAAACTTTTTCAACGAGCTCGAAATCGTCTTCGCCGATGTGGTGATGGCCATCATTGCAGATTTCATGCTGGTTTATCTTCCTGCGCCTACTGTTGCGCTTAGACCGCCACTCTCAGGCACTGCAGGGCCTATTGCTAAGTTTTTCCATGGCTGCCCAGATAATGCTTTTCAGGTTGCTCTGTCTGGGACATCATATTCATTGATACAGAGGATTGGTGCAATTGTGCGTAATGGGTCTAAGCTTTTTGCTGTTGGTACTGCTTCATCACTGGTTGGTACTTCTGTGACAAATGCCTTAATCAATGCAAAGAAAGCAGTTAAATCTTCGGAAGGGGAAATTGAAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGTCTATTTCTAGCAACCTCAGGTATCAAGTAGTTGCTGGAATTATTGAACAGAGGCTTTTGGAACCTTTGCTGCATCAGCACAAGCTAATTCTCAGCGCACTGTGTTTTGCTGTGCGAACTGGCAACACGTATTTGGGTTCACTACTGTGGGTGGATTATGCTCGTTGGATAGGTGTTCAGTAG 1104 0.5181 MAIAFSFFTAPTSSSSSFSSSKAVPSLSLSSSLSIRIPRRADRFFPLRSTIGASVGGSFGGHGGGHGGHGHGGGGGGGDDEHANEGRNEALMVVAEAGRALESVPADLAAAIKEGKIPAAVVTRFLELEKSAFFRWLLQFPGFRERLLADDLFLAKVAMECGVGVFTKTAAEYDRRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVALRPPLSGTAGPIAKFFHGCPDNAFQVALSGTSYSLIQRIGAIVRNGSKLFAVGTASSLVGTSVTNALINAKKAVKSSEGEIENVPILSTSAAYGVYMSISSNLRYQVVAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARWIGVQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0218 367 Pfam Protein RETICULATA-related 145 321 IPR021825 -
Vra2g0218 367 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 18 367 - -
Vra2g0218 367 MobiDBLite consensus disorder prediction 58 84 - -
Vra2g0218 367 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 18 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0218 Vra-Chr2 1632067 1635345 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0218 - - gmx:100811998 521.161