Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0217 ATGGCTTCTCTTCTGCTCTTCAACAACCTCCAATCTCCTCCCCTTTCACCACCACACGCCACCACCTTCAACAACACACCAACCGCAACCCTCTCATTCTTTTCCAAAGCCAAACCCCCATTCATCCTCAAATGCTCTTCTACCTCAAACCTAACCCCAAAAATGGACCAAGAAGACGTCGAAGGAAAAGAACAAGAAACGTTTGATTTTGAGGCTCCCTTGAGCCAAGTGTGGAGGGAAATCCAAGGCATGAAGGATTGGAAAGGGTTGATAGAGCCAACCATGAACCCTCTCCTCCGACGAGAAATAATCCGGTACGGGGAACTGGCACAAGCATGCTACGACTCCTTCGACTTCGACCCTCATTCCAAGTACTGCGGAACCTGCAAGTACCATCCCTCCCACTTCTTCCACCAACTCAACATTCCCCACTCCGGCTACACCATCACCCGCTACCTCTACGCCACCTCCAACATCAACCTCCCCAACTTCTTCCAGAAGTCCAACGTCGCCTCCGTCTGGAGCCCGCACGCCAACTGGATGGGCTACGTCGCCGTCATCACCGACAAGGAACACATCAAACACCTTGGTCGCCGGGACATCCTAATTGCATGGCGCGGAACAGTCACCTACGTCGAATGGATCCACGACCTCAAAGACATTCTTCGTCCCGCGCTCTTCTCCAGAGACCAAACCATCAAGGTGGAATCTGGATTCCACGACTTGTACACCAAGAAAGAAGACTCCTGCACCTATTGCTCTTTCTCCGCTCGCGAACAAGTACTCTCAGAGGTTAAACGTCTTCTTAACTACTACAAAGACGAAGAGATAAGCATCACCGTCACCGGGCACAGTCTCGGTGCTGCCTTGGCCGTTCTGAGCGCGTACGACATAGCCGAGGTTAGGTTAAACGTGGTTGGCGACGGTCGCGAACGTGTTCCCGTGACGGTGTTTTCGTTTGCAGGGCCTAGGGTTGGGAACTTGAAGTTTAAAGAGCGGTGTGAGGAGCTCGGGGTGAAGGTTCTGAGAGTGGTGAACGTGCACGATGTGGTACCCACCGTGCCGGGGATAATAACGAACGAGAAGTTTCGGTTTCAGAAGTATATAGAGGATGCGCTGTCGTTTCCGTGGAGCTATGCGCACGTGGGGACGGAGATTGCGTTGGATCACAGAGAGAGTCCGTTCGTGAAGGGGAACGTGGATCTGGTGAGTGCGCATAACTTGGAGGTTCATCTGCACCTCGTTGATGGCTACCATGGGAAGGAGAAGAGGTTCTGCTTGGCGTCGAAGCGTGACATAGCGCTTGTGAACAAGAGCTGTGATTTTCTCAGGAGTGAGTACGGCGTTCCGCCGCACTGGCGGCAGGACGAGAACAAGGGGATGGTGAGGGGCGGCGATGGGCGGTGGGTTCTGCCGGAGCGCCCCAGATTGGAGGCTCATCCACCAGACATGGCCCACCATCTACAGCTAGTGTTGGACAACCACCTCGCAGGTCAGCAATTAGAAACCACTTAA 1515 0.536 MASLLLFNNLQSPPLSPPHATTFNNTPTATLSFFSKAKPPFILKCSSTSNLTPKMDQEDVEGKEQETFDFEAPLSQVWREIQGMKDWKGLIEPTMNPLLRREIIRYGELAQACYDSFDFDPHSKYCGTCKYHPSHFFHQLNIPHSGYTITRYLYATSNINLPNFFQKSNVASVWSPHANWMGYVAVITDKEHIKHLGRRDILIAWRGTVTYVEWIHDLKDILRPALFSRDQTIKVESGFHDLYTKKEDSCTYCSFSAREQVLSEVKRLLNYYKDEEISITVTGHSLGAALAVLSAYDIAEVRLNVVGDGRERVPVTVFSFAGPRVGNLKFKERCEELGVKVLRVVNVHDVVPTVPGIITNEKFRFQKYIEDALSFPWSYAHVGTEIALDHRESPFVKGNVDLVSAHNLEVHLHLVDGYHGKEKRFCLASKRDIALVNKSCDFLRSEYGVPPHWRQDENKGMVRGGDGRWVLPERPRLEAHPPDMAHHLQLVLDNHLAGQQLETT* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0217 504 CDD Lipase_3 152 391 - -
Vra2g0217 504 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 50 493 - -
Vra2g0217 504 SUPERFAMILY alpha/beta-Hydrolases 103 394 IPR029058 -
Vra2g0217 504 Gene3D alpha/beta hydrolase 77 483 IPR029058 -
Vra2g0217 504 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 50 493 - -
Vra2g0217 504 Pfam Lipase (class 3) 203 357 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0217 Vra-Chr2 1627265 1629483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0217 74 492 Acyl Lipid Metabolism Gene Families AT1G51440 72.727 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0217 - - gmx:100795661 800.045