Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0216 ATGAGCAGCAACATAGAAAAAGTTGTGTGTGTGACTGGAGCTTCTGGTTTCATTGCTTCATGGATCGTCAAATTCCTTCTCCAACGTGGCTACACTGTCAGAGCTACTGTTCGTAACCCAGCTAATCATGAAAAGGTTGACCACTTGCTGAAACTTGATGGAGCAAAGGAAAGGTTACATCTCTATAAGGCAGATCTTCTAGAAGAAGGATCATTTGACGATGCTTTTGAGGGTTGTTATGGTGTTTTTCACACTGCTTCACCGGTTCAGTCCATAGTCAACGACCCACAGAAAGAGTTAATTGATCCAGCGGTTAAAGGAACTCTTAACGTTGTTAAATCATGTGCAAAATCGACATCAGTGAAACGAATAGTTTTAACTTCTTCTTTTGCTGCGGTTTCGTACAATGGAAGGCCTCGAGCTCCCGAGGTTGTAGTTGATGAAACTTGGTTTTCAGATCCAAACATCTTAAGGGAAAATGAGAAATGGTATTCATTTGGAAAGACTTTGGCTGAGGATGCTGCCAGAAAATGTTTGGACGAACAAGACATTAAGTTGATTGTTATTAACCCAGCAATGACCATAGGGCCTCTGTTGCAACAAGAAATGAACGAAACTTCTTCCAGAATTTTAAACCTAATCAATGGTTCAAAAACGTTGTTTCCAAATTTGAGTTTTGGGTGGGTGAATGTGAAAGATGCTGCAAATGCTCATGTTCAGGCATATGAGAGTGATTCAGCTAGTGGAAGATATTGTCTAGTTGAAAGAGTTGCACACTTTTCCGAAATTGTTAATATTTTAGGTCAGATGTACCCAACTTTGCAGATTGCAGACAAGTGTGAAGATGATGAGCCATTTGTACCAACATATCAGGTTTCCAAAGAAAAAGCAAAGAGCTTGGGAATTGAGTTTATTTCCTTGGAAGATAGCCTTAGGGAGACAGTTGAATGTTTCAAAGAAAAGAAGCTTCTTGACTTCTAG 981 0.3976 MSSNIEKVVCVTGASGFIASWIVKFLLQRGYTVRATVRNPANHEKVDHLLKLDGAKERLHLYKADLLEEGSFDDAFEGCYGVFHTASPVQSIVNDPQKELIDPAVKGTLNVVKSCAKSTSVKRIVLTSSFAAVSYNGRPRAPEVVVDETWFSDPNILRENEKWYSFGKTLAEDAARKCLDEQDIKLIVINPAMTIGPLLQQEMNETSSRILNLINGSKTLFPNLSFGWVNVKDAANAHVQAYESDSASGRYCLVERVAHFSEIVNILGQMYPTLQIADKCEDDEPFVPTYQVSKEKAKSLGIEFISLEDSLRETVECFKEKKLLDF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0216 326 Pfam NAD dependent epimerase/dehydratase family 9 245 IPR001509 -
Vra2g0216 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 319 IPR036291 -
Vra2g0216 326 Gene3D - 7 326 - -
Vra2g0216 326 CDD FR_SDR_e 9 301 - -
Vra2g0216 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 324 - -
Vra2g0216 326 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0216 Vra-Chr2 1619627 1622665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0216 7 326 Miscellaneous Gene Families AT5G19440 65.625 4.81e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0216 - - gmx:100804704 519.235