Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0215 ATGAGCAGCAACATAGAAAAAGTGGTATGTGTGACTGGAGCTTCTGGTTTCATTGCTTCATGGATCGTCAAATTCCTTCTCCAACGTGGTTACACTGTCAGAGCTACTGTTCGTAACCCAGCTAATCATGAAAAGGTTGACCACTTGCTGAAACTTGATGGAGCAAAGGAAAGGTTACATCTCTATAAGGCAGATCTTCTTGAAGAAGGATCATTTGACGATGCTTTTGAGGGTTGTTATGGTGTTTTTCACACTGCTTCAAGGGTTCAGCTCATAGTCAACGACCCACAGAAAGAGTTAATTGATCCAGCGGTTAAAGGAACTCTTAACGTTGTTAAATCATGTGCAAAATCGACATCAGTGAAACGAATTGTTTTAACTTCTTCTTTTGCTGCGGTTTTGTACAATGGAAGGCCTCGAGCTCCCGAGGTTGTAATTGATGAAACTTGGTTTTCAGATCCAAACATCTTAAGTGAAAATGAGATATGGTATGCATTATCAAAGACTTTGGCTGAGGATGGTGCGAGAAAGTTTTTGGACGAACAAGACATTAAGTTGATTGTTATTAACCCAGCAATGACCATAGGACCTCTGTTGCAACAAGAAATGAACGAAAGTTCTTCCTGGATTTTAAACCTAATCAATGGTTCGCAAACTTTTCCAAATTTGAGTTTTGGGTGGGTGAATGTGAAAGATGTTGCAAATGCTCATGTTCAAGCATATGAGAGTGATTCAGCTAGTGGAAGATATTGTCTGGTTGAAAAAGTTGCACATTTCTCCCAAATTGTTAAGATTTTAGGTGAGATGTACCCAACTTTGAAGATTGCAGACAAGTGTGAAGTTGATGGGCCATTTATGCCAACATTTCAGGTTTCCAAAGAAAAGGCAAAGAGCTTGGGAATTGAGTTTATTTCATTGGAAGAGAGCCTTAGGGAGACAGTTGAATGTTTAAAAGAAAAGAAGTTGGTTGAGTTCTAG 978 0.3926 MSSNIEKVVCVTGASGFIASWIVKFLLQRGYTVRATVRNPANHEKVDHLLKLDGAKERLHLYKADLLEEGSFDDAFEGCYGVFHTASRVQLIVNDPQKELIDPAVKGTLNVVKSCAKSTSVKRIVLTSSFAAVLYNGRPRAPEVVIDETWFSDPNILSENEIWYALSKTLAEDGARKFLDEQDIKLIVINPAMTIGPLLQQEMNESSSWILNLINGSQTFPNLSFGWVNVKDVANAHVQAYESDSASGRYCLVEKVAHFSQIVKILGEMYPTLKIADKCEVDGPFMPTFQVSKEKAKSLGIEFISLEESLRETVECLKEKKLVEF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0215 325 Gene3D - 7 325 - -
Vra2g0215 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 323 - -
Vra2g0215 325 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 323 - -
Vra2g0215 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
Vra2g0215 325 CDD FR_SDR_e 9 300 - -
Vra2g0215 325 Pfam NAD dependent epimerase/dehydratase family 9 243 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0215 Vra-Chr2 1614172 1617044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0215 7 325 Miscellaneous Gene Families AT5G19440 64.577 2.48e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0215 - - gmx:100804704 518.464