Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0214 ATGAGTAGTGAGGGAAAGTTGGTGTGTGTGACTGGTGCTTCAGGTTACATTGCTTCATGGATTGTGAAGTTCCTTCTTCAACGTGGTTACACCGTCAGAGCCACTGTTCGCAATCCAAATGATCACAGAAAAGTAGAACATTTGCTTAAGCTTGAAGGTGCAGAGGAGAGACTTCACCTGGTAAAGGCCGATCTTTTGAGTGAAAATTCCTTTGACTCTGTTGTCGAGGGTTGCGATGGAGTTTTCCACACTGCTTCTCCCTTTTTCAACAACGTCAAAGACCCACAGGCTGAACTGATTGACCCTGCTGTGAAAGGAACCCTAAATGTTCTTAAATCAGTTGCGAAATCATCATCTGTGAAACGAGTCGTTTTAACCTCTTCAGTGGCTGCTGTTGCATACAATGAAAGGCCTAAAACTCCCGAAGTTGTAGTTGATGAAACATGGTTTTCAAATCCAGATTACTGTAGGGAATTGCAGTTGTGGTACCTTCTTTCAAAGACATTGGCTGAGGAAGCTGCCTGGCAATTTTCCAAAGAAAACAACCTTGACTTAGTTTCTGTTAACCCAGCAATGGTTGTCGGGCCACTGTTGCAAGCAGAGCTAAACACTAGTGCTTCTACAATCTTAAACCTAATAGATGGTTCAGAAACTTTTCCAAATAGTACTTACGGATGGATCAATGTGAAGGATGTTGCAAACGCTCATATTCAGGCTTATGAGATTGCTTCTGCAAGTGGAAGATATTGTTTAGTTGAGAGAGTGGCACATTTCTCCGAACTCGCCAAGATTTTGAAAGATCTATACCCAACATATCAAATTCCAGAAAAGTCTGCAGACGATAAGCCCTATGTACCAACATTTCAGGTTTCGAAAGAAAAGGCAAAATCGTTGGGGCTTGAATTCATTCCTTTAGAAGTGAGTCTTAAAGAGACTGTGGAAAGTTTGAAAGAAAAGAACTTTGCCAACTTTTAA 975 0.4144 MSSEGKLVCVTGASGYIASWIVKFLLQRGYTVRATVRNPNDHRKVEHLLKLEGAEERLHLVKADLLSENSFDSVVEGCDGVFHTASPFFNNVKDPQAELIDPAVKGTLNVLKSVAKSSSVKRVVLTSSVAAVAYNERPKTPEVVVDETWFSNPDYCRELQLWYLLSKTLAEEAAWQFSKENNLDLVSVNPAMVVGPLLQAELNTSASTILNLIDGSETFPNSTYGWINVKDVANAHIQAYEIASASGRYCLVERVAHFSELAKILKDLYPTYQIPEKSADDKPYVPTFQVSKEKAKSLGLEFIPLEVSLKETVESLKEKNFANF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0214 324 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2 321 - -
Vra2g0214 324 Gene3D - 6 324 - -
Vra2g0214 324 CDD FR_SDR_e 8 300 - -
Vra2g0214 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 321 - -
Vra2g0214 324 Pfam NAD dependent epimerase/dehydratase family 8 241 IPR001509 -
Vra2g0214 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 317 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0214 Vra-Chr2 1606217 1608564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0214 2 324 Miscellaneous Gene Families AT5G19440 69.969 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0214 - - gmx:100809326 565.459