Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0210 ATGAGCGAGACGAGAGGGAAGGTAGTGTGCGTGACCGGTGCTTCTGGTTTCATTGCTTCATGGATCGTCAAATTCCTTCTTCAACGTGGTTACACAGTCAGAGCCACAGTTCGCGACAAAGGTAATCCGAAAAAGGTGTCGCACTTGGTTAACCTTGAGGGAGCGAAAGAGAGGCTGCATCTGTTTAAAGCGGATTTGTTGGAAGAAGGTTCGTTCGATTCCGCTGTCGAAGGTTGCCACGCTGTTTTTCATACTGCTTCACCTGTACGTTTCGTGGTCAACAACCCACAGGCTGAATTGATTGATCCTGCAGTGAAGGGAACTCTTAATGTTCTCAAATCATGTGCAAAATCGCCATCTGTGAAGCGTGTTGTCTTAACTTCTTCTACTTCTGCAGTTGCATATACTGGAAAACCAAAAACTCCTGAAGTAGTTGTTGATGAGACATGGTTTTCAGATCCAGATTTCTGTAGGGAATCAGAGTTGTGGTACACGCTTTCAAAGACCTTGGCCGAGGAAGCTGCCTGGAAATTTGTAAATGAAAACAACATTGACATGATTGTTATTAACCCAGCAATGGTAGCAGGACCTCTCTTACAAGCAGAGATTAATGAAAGCGTTGAGCCAATTTTAAACCTAATAAACGGTAAACCATTTCTAAATAGATCTTTTGGGTGGGTCAACGTGAAAGATGTTGCCAACGCTCATATTCTGGCTTATGAGATCGCTTCGGCCAGTGGAAGATACTGTTTGTCTGAGAGAGTCATACACTACTCTGAGCTTGCTAGGACTTTACGTGATTTGTATCCTACATTTCAAATTCCAGATAAGTGTGAGGTAGATGAGCCGTATATGCCAACATACCAGATTTCCACAGACAAGGCAAAAAAGGACTTTGGAATAGAGTTTACTCCTTTGGAAGTGAGTATCAGGGAGACTGTAGAAAGCTTCAGAGAAAAGAAGATTATCAACTTTTAA 978 0.4274 MSETRGKVVCVTGASGFIASWIVKFLLQRGYTVRATVRDKGNPKKVSHLVNLEGAKERLHLFKADLLEEGSFDSAVEGCHAVFHTASPVRFVVNNPQAELIDPAVKGTLNVLKSCAKSPSVKRVVLTSSTSAVAYTGKPKTPEVVVDETWFSDPDFCRESELWYTLSKTLAEEAAWKFVNENNIDMIVINPAMVAGPLLQAEINESVEPILNLINGKPFLNRSFGWVNVKDVANAHILAYEIASASGRYCLSERVIHYSELARTLRDLYPTFQIPDKCEVDEPYMPTYQISTDKAKKDFGIEFTPLEVSIRETVESFREKKIINF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0210 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
Vra2g0210 325 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 4 323 - -
Vra2g0210 325 Pfam NAD dependent epimerase/dehydratase family 9 241 IPR001509 -
Vra2g0210 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 323 - -
Vra2g0210 325 CDD FR_SDR_e 9 297 - -
Vra2g0210 325 Gene3D - 7 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0210 Vra-Chr2 1574524 1580478 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0210 6 325 Miscellaneous Gene Families AT5G19440 67.601 6.04e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0210 - - gmx:100799213 569.311