Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0206 ATGACGACGTCGTTCGGTGCAGCTACCACCTCGGCGGCGCTCAAGGACGCCAAGCTTCAGATCCCAAACTTCCATGGCTTGAGGCCCGCCACCGCCTCTTCTCTCACGCGCAATGCTCTCCCGCTTCCTCCATCCACACGTTCTCTCGTCATCACTCGTGCCGTTTCCACGCCCGTGCAGCCTGAAACTACCACTGTAAAGCGCAGCAAAGTTGAAATATTCAAAGAACAAAGCAATTTCATAAGATATCCTCTGAACGAGGACATGTTGACGGATGCCCCTAATATAAGTGAGGCTGCCACTCAGTTGATCAAGTTTCATGGAAGCTATCAACAGTACAATAGAGAAGAGCGTGGTTCCCGAAGCTACTCTTTCATGATACGTACTAAGAACCCTTGTGGGAAGGTTTCAAACCAGCTTTACTTGACCATGGATGATCTTGCTGACCAGTTTGGGATTGGGACGCTTCGGCTCACCACCAGACAAACTTTTCAGCTCCATGGTGTTCTTAAGAAGGATCTTAAAACAGTGATGGGTACCATTATTAGAAATATGGGCTCGACTCTTGGTGCGTGTGGTGACCTAAACAGGAATGTGCTTGCTCCTGCTGCGCCCCTCGTGAGAAAGGATTATCTTTTGGCTCAGCAGACTGCGGAAAACATTGCTGCGCTCCTGTCTCCCCAGTCTGGTTTCTACTATGATATTTGGGTAGACGGAGAAAAGATTTTGTCATCAGAACCGCCTGAAGTAGTTCAGGCACGGAATGACAATTCTCATGGGACAAATTTCCCGGATTCACCGGAGCCCATCTACGGTACTCAGTTCTTGCCAAGGAAATTCAAAATTGCTGTTACAGTACCAACTGATAACTCGGTGGACATTCTCACAAATGATATTGGTGTTGTTGTTGTCACCGATGAAGCCGGGGAGCCTCAAGGGTACAACATATATGTAGGTGGAGGAATGGGAAGAGCTCATAGGGTAGAAACCACTTTTCCTCGCTTGGCCGAACCGTTAGGTTATGTACCAAAGGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTCACACAACGAGAAAATGGGAGACGAGATGACCGCAGGTATAGTAGAATGAAATATCTGATCAGCTCTTGGGGAATTGAAAAGTTTAGAAGCGTGGTTGAGCAGTATTATGGCAAGAAATTTGAACCTTTCCGTGTATTGCCAGAATGGGAATTTAAAAGTTATCTTGGCTGGCATGAACAGGGTGATGGCAAATTATTTTATGGGCTTCATGTTGATAATGGTAGAATTGGTGGAAAGATGAAAAAGACATTGAGGGAGGTTATTGAGAAGTATAATTTGAATGTGAGAATCACTCCAAATCAGAACATCATCTTGACCGATGTTCGTTCTTCATGGAAGCGTCCAATTACAACAACTCTTGCGCAGGCTGGTCTGCTGCAACCTAGATTTGTAGATCCCCTCAACATAACAGCAATGGCATGCCCTGCTTTCCCATTATGTCCACTGGCAATTACTGAAGCTGAACGTGGGATACCTGACATTCTTAAGCGTATTCGGGCTGTTTTTGATAAGGTTGGTCTGAGGTATAGTGAGTCTGTAGTTGTAAGGATAACTGGCTGCCCTAATGGCTGCGCTAGACCATACATGGCTGAACTTGGGCTAGTTGGTGATGGCCCAAACAGTTACCAGATTTGGCTTGGAGGGAACAAGAAACAAACATCATTAGCTCGAAGTTTCATGGACAAGGTGAAGCTTCACGACCTTGAAAAAGTTTTGGAACCTTTATTTTATTATTGGAAGCAAAGGCGTCAATCTAAAGAATCATTTGGTGACTTCACAAACAGAATGGGATTTGATAAGCTTAAGGAACATGTTGAGAAATGGGAAGGTCCGGTGGTTGCACCATCACGCCACAATCTCAAGCTTTTTGCTGACAAGGAGACGTACGATGCAATGGATGAATTGGCAAAGCTTCAAACAAAAGTGCTCATCAGTTGGCCATGGAAATTATCCGTAATTATGTTGCTTCTAATCAAAATGGAAAAGGTGAATGATTTCCGTTTACTTAGTCAAGAAATGTACGAGAGATGTTGCTTCGTGGTTGACAGGAATGGTGGATGGGCAACTCAACACAACTCTCTGTTGTTACTGTGTGGTAACTCTGGGGATAGCAACTAA 2187 0.4481 MTTSFGAATTSAALKDAKLQIPNFHGLRPATASSLTRNALPLPPSTRSLVITRAVSTPVQPETTTVKRSKVEIFKEQSNFIRYPLNEDMLTDAPNISEAATQLIKFHGSYQQYNREERGSRSYSFMIRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVLKKDLKTVMGTIIRNMGSTLGACGDLNRNVLAPAAPLVRKDYLLAQQTAENIAALLSPQSGFYYDIWVDGEKILSSEPPEVVQARNDNSHGTNFPDSPEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGVVVVTDEAGEPQGYNIYVGGGMGRAHRVETTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRRYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRVLPEWEFKSYLGWHEQGDGKLFYGLHVDNGRIGGKMKKTLREVIEKYNLNVRITPNQNIILTDVRSSWKRPITTTLAQAGLLQPRFVDPLNITAMACPAFPLCPLAITEAERGIPDILKRIRAVFDKVGLRYSESVVVRITGCPNGCARPYMAELGLVGDGPNSYQIWLGGNKKQTSLARSFMDKVKLHDLEKVLEPLFYYWKQRRQSKESFGDFTNRMGFDKLKEHVEKWEGPVVAPSRHNLKLFADKETYDAMDELAKLQTKVLISWPWKLSVIMLLLIKMEKVNDFRLLSQEMYERCCFVVDRNGGWATQHNSLLLLCGNSGDSN* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0206 728 Gene3D Sulfite Reductase Hemoprotein, domain 1 488 635 IPR045854 -
Vra2g0206 728 PRINTS Sirohaem Fe-binding site signature 492 510 IPR006066 GO:0016491|GO:0020037|GO:0051536
Vra2g0206 728 PRINTS Sirohaem Fe-binding site signature 541 559 IPR006066 GO:0016491|GO:0020037|GO:0051536
Vra2g0206 728 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 64 192 IPR036136 GO:0016491
Vra2g0206 728 TIGRFAM sir: sulfite reductase, ferredoxin dependent 60 631 IPR011787 GO:0020037|GO:0050311|GO:0051539
Vra2g0206 728 Pfam Nitrite and sulphite reductase 4Fe-4S domain 491 630 IPR006067 GO:0016491|GO:0020037|GO:0051536
Vra2g0206 728 Pfam Nitrite and sulphite reductase 4Fe-4S domain 218 396 IPR006067 GO:0016491|GO:0020037|GO:0051536
Vra2g0206 728 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 1 633 IPR045169 GO:0016491|GO:0020037|GO:0051536
Vra2g0206 728 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 490 641 IPR045854 -
Vra2g0206 728 Gene3D Sulfite Reductase Hemoprotein, domain 1 192 400 IPR045854 -
Vra2g0206 728 PANTHER BNAA01G31570D PROTEIN 1 633 - -
Vra2g0206 728 Gene3D Sulfite Reductase Hemoprotein;Domain 2 401 484 - -
Vra2g0206 728 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 411 483 IPR036136 GO:0016491
Vra2g0206 728 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 414 467 IPR005117 GO:0016491
Vra2g0206 728 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 124 178 IPR005117 GO:0016491
Vra2g0206 728 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 541 557 IPR006066 GO:0016491|GO:0020037|GO:0051536
Vra2g0206 728 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 193 408 IPR045854 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0206 K00392 - gmx:547693 1244.57