Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0202 ATGATGGATTGCGGCGTTGGATCCATCGTGTGGGTGCGTCGGAGGAACGGGTCGTGGTGGCCGGGTCAAATCCTCGGCCCCGACGACCTCTCCGCTTCTCACCTCACCTCACCCCGATCCGGAACCCCCGTCAAGCTCCTCGGCAGAGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTTAAGGCATTCCGGTGTGGTGAGTTTGATGATTGTATTGAAAAGGCCGAATCTGCTCAGGGGGGACCGCTGAAGAAGAGAGAGAAGTATGCGCGCCGAGAAGACGCCATTCTTCATGCTCTTGAGCTTGAGAAACAGATTTTGAAGAAGCAAGGGAGATCGGGTGGTAGACCATCAAATACCTTTAAAAAGGGTGCGGTTGCATCGCCTCCGGAAACACTAGGAAATGACAATGAAAACCATGCAAGTTCTTTTATGTATTGTGAAAGTGAGTCTGCTGGAGGTTTCTTTCTTCCAGAGAGGGCCAAGGATGGCAATCAGCTGCGCGGGGAAGTGGATTATTCTGAAACAACACCTCGGATGAGGGACTTGCAGGATTTTGGGCTCAGAATTGCCCCTGCAAAAAAGAAGTTTCCATCTTTTGTTGAACCTAACATTTACCAGAAACGTACGGTTGATGATGGTGCTCGGGCTCTTGCAACCGGTGGTATACGCGCTGGCAGTACTCTTCACATGAATGGGGCTGGGCAATTAGGAGCTTCACGAGCAAAGAGGAGCAGATGTGTGTATTTTCCGACCGAGTCCAGTGATTCTCTTGATTACAGAGAGACTCAACCCCGTGTTGAGATGTCACCTTCCCAACGCAGAAGGGAGTTTGCTTATCATGGTTCTATGGTTGGAGAGACTGAATATACTTTTATGGATGATGTTGAATCTGATTCTTCAGAAACAGCCTGTACTGATTCTGATTCTGATTCTTCGGAGACAGAACCAGACTTGGATGAAGACATGACAATATTTTCAGAAACTGGTCATGATGCTGAAGAACATGAAAGCACTAGCAGCGAGGAGCTTGATGAATTAGCGAATTCCAGTGACATGCCTCACCTTTATCCTCGTGACTCAATAACAAGTAATGAAGCTGTGTCTAAATGGCAACTAAAAGGGAAAAGGAATAATCGGAATCTAGTAAAGAGGTCTGTTGGTGCTTCTGATGGAAAATATAATATGTATGGAGCAGATGTTGAAGAAAAGAGTAGTCATTTAAGGCACAATATAAATAGTCCAAGTTTGCACCGCTACAAATTTGATTTTGGTGATACCTTTGACGACGATGATCAAAACTTTGGACTGGAAGATGAATACCCTCTGTCTTCTAGATCCATATCAAGAAGTCAAAGTAAAATTCATCGTGGTGTAGCTTGGAATGATTTGGCCTGGGATGATCATCTAGCTTCTAAAAGACATTGGGATGCTAAAGCATATTCTCCGTTGTACGGTGACCGTAATCATTTTGGCGCTAGGGTCAGGCCAATGCTAGTTGATGTAGATTTGAAAGTTCAAGCAAGCTATCGTAAAGAGTGTGTGCCCTTCATTTCGCTCATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATCCAGGTCGAGGCTCTCAGGGATGGCTCATCTGATATTCTATTTCCTGCAATTGATGACTTCAGTAATGATGTGACTGGTATTGAGGGAAGTAGTATGCTTCCACCAGCATGGAGGACTGCAAGGAGAACTGCAAATTTTCGCATCCCGCGCCCCCATGTGCCATCATCAAATGGTGCTGAAGGTGCGGCTGAGTTCCCCTCTTCAGATCAAGAACAAAGCTTTGAATATAAAAGTTTAAATGCTGGAAGTTCCAGCCACCAGGCTAGCCTTCAAAAGAGGAGTGGCCTTAAAAGCCATCGTTCTTCAGCAGAAAAAAGGTCCTTAAAAAAGGTGCCTAAGAAATTGAGCTTGTCATCTTGCCAAAAAACTCGAACTCTGTCCTCATTATCTACTGAGCATAATTTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGACATTTCTGGGTCCACTACAGTAGCTTGCATACCAGTCCAGTTAGTGTTTAGTAGATTACTCGAGAAGATTAATAGGCCTCCATTGAAAACACCTAGTAATGTGGCTTTGCTGAATACTGGTGTGGATAGAAATTCATAG 2220 0.4482 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAESAQGGPLKKREKYARREDAILHALELEKQILKKQGRSGGRPSNTFKKGAVASPPETLGNDNENHASSFMYCESESAGGFFLPERAKDGNQLRGEVDYSETTPRMRDLQDFGLRIAPAKKKFPSFVEPNIYQKRTVDDGARALATGGIRAGSTLHMNGAGQLGASRAKRSRCVYFPTESSDSLDYRETQPRVEMSPSQRRREFAYHGSMVGETEYTFMDDVESDSSETACTDSDSDSSETEPDLDEDMTIFSETGHDAEEHESTSSEELDELANSSDMPHLYPRDSITSNEAVSKWQLKGKRNNRNLVKRSVGASDGKYNMYGADVEEKSSHLRHNINSPSLHRYKFDFGDTFDDDDQNFGLEDEYPLSSRSISRSQSKIHRGVAWNDLAWDDHLASKRHWDAKAYSPLYGDRNHFGARVRPMLVDVDLKVQASYRKECVPFISLMSKLDGRAIVGHPIQVEALRDGSSDILFPAIDDFSNDVTGIEGSSMLPPAWRTARRTANFRIPRPHVPSSNGAEGAAEFPSSDQEQSFEYKSLNAGSSSHQASLQKRSGLKSHRSSAEKRSLKKVPKKLSLSSCQKTRTLSSLSTEHNFSRKPLHDSSSYQTDRLTKPDISGSTTVACIPVQLVFSRLLEKINRPPLKTPSNVALLNTGVDRNS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0202 739 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 238 737 - -
Vra2g0202 739 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 119 - -
Vra2g0202 739 MobiDBLite consensus disorder prediction 653 692 - -
Vra2g0202 739 Gene3D - 2 116 - -
Vra2g0202 739 SUPERFAMILY Tudor/PWWP/MBT 5 110 - -
Vra2g0202 739 MobiDBLite consensus disorder prediction 301 328 - -
Vra2g0202 739 Pfam PWWP domain 7 87 IPR000313 -
Vra2g0202 739 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
Vra2g0202 739 MobiDBLite consensus disorder prediction 600 635 - -
Vra2g0202 739 MobiDBLite consensus disorder prediction 301 365 - -
Vra2g0202 739 MobiDBLite consensus disorder prediction 329 343 - -
Vra2g0202 739 MobiDBLite consensus disorder prediction 113 139 - -
Vra2g0202 739 PANTHER T17B22.17 PROTEIN-RELATED 2 119 IPR044679 -
Vra2g0202 739 PANTHER T17B22.17 PROTEIN-RELATED 238 737 IPR044679 -
Vra2g0202 739 MobiDBLite consensus disorder prediction 587 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0202 Vra-Chr2 1523507 1526906 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0202 - - gmx:102667517 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0202 2 1523507 1526906 Vra2g0202 2 1523507 1526906 ECH