Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0199 ATGCAAGAACTTAGAAAGGACTCTGAACCTGCGATTAATGGAGAAATGGGTGGCTCAAAGTTCTTTCCTTGGAATACAAATGCAATGGCTCTATCGTTTCCCCCTCAAACCTTTTCTCTTCCGTCTCCGATCCCTCAATGGCCTCAAGGACAAGGTTTTGCTTCCGGCCGTATAAATCTTGGTGAAATAGAAGTTTCCATGGTCACCAGGTTTGAGTTTATTTGGAGTAGCAGTGCTATGCAAGACACTAAAAATGCTGTTACATTCTATAGGCCTGTAGGAGTACCTGATAGTTTTCGTATTCTTGGTCACTATTGTCAATCCGATAACAAGCCTTCAAGGGGTTTTGTACTTGTTGCAAGGGAAGTTGAAACTGCTGATATTAACAATCAAGATAAGTTACCTCCTATGAAGAATCCCCTTGATTTTAGTTTGGTTTGGGGTGAAAATGGAAGAAATTTGAAAACTTTAGGCGTATACTTTTGGGTACCTGAACCTCCTGCAGGTTACAAGGCCCTTGGATGTTTGGTTACTACCAAACCTGTGAAGCCTTTTTTGGATGAAATGTGCTGTGTTCGTACCGATCTCACCTATAGATGTGAACCTTATCGCCAATTACTCACTGCTGGCTCAAGCATTCCTGAGTTTTCATTTCAGGTGTGGAGTTTGAGACCTTGTGATCGTGGCATACTAGGGAAAGGAGTTTCTGTTGGGACTTTTTTCTGCAGCAATGGCTGGTGGACCATGACAGAAGATGTACCTGTTGCATGCTTGAAGAATTTAAATCCTGCATTGCAAGCAATGCCAAATTTGCAACAAATACATGCACTTATTAAGCATTATGGCCCTACTGTTTTCTTTCATCCTCAGGAAATTTACTTGCCATCTTCTGTGGAATGGTTTTTCAACAATGGAGCACTTTTGTACACAAAGGGTGTATCTGCAGGAGAGAAAATTGATGCAAACGGATCAAATCTACCAGGTGGGGGAACAAATGATGGTCAATATTGGATAGATTTGCCAAGAGATGATAAAAGGGAGCTTGTCAAACGTGGGAACTTGAAAAGTGCAAAGGTTTATGTTCATGTGAAGCCTGTTTTTGGAGGAACTTTTACTGACATTGCAATGTGGGTGTTTTGCCCTTTCAATGGACCAGCCACTCTGAAAATTGGAATCAAGGATATTCCTTTGAGCATGATTGGAGAGCATGTTGGTGATTGGGAGCATTTTACACTTCGCATAAGCAACTTCAGTGGAGAACTCTACAGTATATACTTCTCACAGCACAGTGGTGGTGAATGGGTAGATGCATGTGACTTGGAATATATTGAAGGTAATAAAGCTATTGTTTACTCATCAAAATCTGGACATGCAAGTTACCCTCATGCTGGTACCTGCATCCAAGGTTCTTCAAAACTTGGGATTGGCATTAGGAATGATGCTGCTCGCAGCAATTTGTATGTGGATTCTAGTATTCAGTATGAGCTTGTTGCAGCTGAGTATCTTGAAAATGAGATCACTGAACCTCAATGGTTGCAATTTATGAGAGAATGGGGCCCCAAAATTGTTTATGATTCAAAAACTGAGCTGGATAAGGTAATCAATGCTCTTCCTCGGCTGCTCAAGTATTCTGTAAAGGGCTTATTTAACAAGTTCCCAGTGGAACTTTATGGTGAGGAAGGTCCCACTGGGCCAAAAGAGAAAAATAATTGGTTACAGGATGAAAGATGGTGA 1734 0.4123 MQELRKDSEPAINGEMGGSKFFPWNTNAMALSFPPQTFSLPSPIPQWPQGQGFASGRINLGEIEVSMVTRFEFIWSSSAMQDTKNAVTFYRPVGVPDSFRILGHYCQSDNKPSRGFVLVAREVETADINNQDKLPPMKNPLDFSLVWGENGRNLKTLGVYFWVPEPPAGYKALGCLVTTKPVKPFLDEMCCVRTDLTYRCEPYRQLLTAGSSIPEFSFQVWSLRPCDRGILGKGVSVGTFFCSNGWWTMTEDVPVACLKNLNPALQAMPNLQQIHALIKHYGPTVFFHPQEIYLPSSVEWFFNNGALLYTKGVSAGEKIDANGSNLPGGGTNDGQYWIDLPRDDKRELVKRGNLKSAKVYVHVKPVFGGTFTDIAMWVFCPFNGPATLKIGIKDIPLSMIGEHVGDWEHFTLRISNFSGELYSIYFSQHSGGEWVDACDLEYIEGNKAIVYSSKSGHASYPHAGTCIQGSSKLGIGIRNDAARSNLYVDSSIQYELVAAEYLENEITEPQWLQFMREWGPKIVYDSKTELDKVINALPRLLKYSVKGLFNKFPVELYGEEGPTGPKEKNNWLQDERW* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0199 577 Pfam Vacuolar protein sorting-associated protein 62 35 575 IPR009291 -
Vra2g0199 577 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 19 577 - -
Vra2g0199 577 PANTHER - 19 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0199 Vra-Chr2 1507744 1510742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0199 - - gmx:100793026 889.797