Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0187 ATGGCCGGAAAGTACATTCCACGATCGAAATCGCGAGCCACTCTGTTCCTCTTCCTTCTCGCTTTCTCTCTCCTCTTCATCCTCTTCTCTCTCTCTCCTCTCCGCTCTCCCTCCCTTTCTCCCACCAATGTCCGCGTTCCCGATGCCGAAACTTCCTTCCTCGTCTCCCTCGACCGTTTCCTCACCGCCACGCCGTCCTCCCTTTCCGACGACACCGCCCACGCCGGACAAGAGGAGCTCGTCGCCAAGCTCGACGACGCCGTTTATCGCTCCGAGATGGACAGGCTGTACACCGATCCTTACTACCCGCTCTCCCTTCCCCTTAGGGTTTACGTCTACGACATGCCCCCAAAGTTCACCTACGATTTGCTCTGGCTCTTCAAAAGGACCTACCGAGAAACCTCCAATCTCACCTCCAATGGAAGTCCCGTTCACCGTCTCATCGAACAGCACTCCATTGATTACTGGCTCTGGGCGGATCTCATCGCACCCCAATCGAAGAGGCTCTTGAACAGTGTCATCAGGGTTCACCGACAGGAGGAGGCTGATTTGTTTTACGTACCCTTCTTTACCACTATCAGCTTCTTCCTCATGGAAAAACAACAATGCAAGGCCCTTTATAGGGAAGCTTTGAAGTGGATCACTGATCAACCTGCATGGAAGCGCTCTGGTGGTAGAGATCACATAATCCCTGTGCATCATCCCTGGTCTTTTAAGTCTGTTCGAAAAGACGTGAAGAAAGCAATATGGTTGTTGCCTGATATGGATTCCACAGGGAACTGGTACAAGCCAGGACAGGTTTTTCTGGAGAAGGACCTGATTCTTCCATATGTTCCCAATCTTGATTTATGTGATGCCAAGTGTTTGGCTGAGACAAATCCTAAGAGAAATATGCTGCTTTTCTTTCGGGGCCGGCTCAAGAGAAATGCGGGAGGAAAGATACGCTCTAAACTTGTGGACGAATTACGTGGGGCTGATGGTGTGAGTATAGAGGAGGGAACAGCTGGGGAGGGGGGAAAAGAAGCTGCTCAAATTGGCATGCGCAAGTCTCTATTTTGCCTAAGCCCGGCTGGTGACACTCCATCCTCTGCGAGATTATTTGATGCTATTGTTAGTGGATGCATTCCAGTTATAATAAGTGATGAGCTGGAGCTTCCTTTTGAAGGAATACTTGATTACAGGAAGATAGCATTGTTCATTTCCTCTAATGATGCCCTAAAGCCAGGTTGGCTTTTGAATTATTTGAAAGGCATCAGACCTGCTCGTATCAAAGAAATGCAACAAAATCTTGCTAAGTATTCAAGGCATTTCCTGTATTCTAGTCCAGCTCAGCCATTGGGTCCTGAAGACTTGGTTTGGAAAATGATGGCTGGGAAGTTGGTGAACATCAAGCTTCACACAAAAAGATCTCAACGTGTAGTGGAAGGATCTAGAAAACTGTGTACTTGTGATTGCAGGCCTGCCAATATTACTAAAACTGCTTCAATTATTTCTTGA 1497 0.481 MAGKYIPRSKSRATLFLFLLAFSLLFILFSLSPLRSPSLSPTNVRVPDAETSFLVSLDRFLTATPSSLSDDTAHAGQEELVAKLDDAVYRSEMDRLYTDPYYPLSLPLRVYVYDMPPKFTYDLLWLFKRTYRETSNLTSNGSPVHRLIEQHSIDYWLWADLIAPQSKRLLNSVIRVHRQEEADLFYVPFFTTISFFLMEKQQCKALYREALKWITDQPAWKRSGGRDHIIPVHHPWSFKSVRKDVKKAIWLLPDMDSTGNWYKPGQVFLEKDLILPYVPNLDLCDAKCLAETNPKRNMLLFFRGRLKRNAGGKIRSKLVDELRGADGVSIEEGTAGEGGKEAAQIGMRKSLFCLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYRKIALFISSNDALKPGWLLNYLKGIRPARIKEMQQNLAKYSRHFLYSSPAQPLGPEDLVWKMMAGKLVNIKLHTKRSQRVVEGSRKLCTCDCRPANITKTASIIS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0187 498 PANTHER EXOSTOSIN FAMILY PROTEIN 2 486 - -
Vra2g0187 498 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 486 IPR004263 GO:0006486|GO:0016757
Vra2g0187 498 Pfam Exostosin family 107 415 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0187 Vra-Chr2 1412344 1417168 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0187 - - ccaj:109799213 829.706