Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0184 ATGTCGATGAGATCGGTGAAAGTAAGCAACATCTCTTCTGGTGCAACCGAGCAAGATTTGAGGGAATTTCTTACCTTCCCTGGAAAAATTGAACATGTTGAAATGGGAAGTGACAAGGGAAGTTCCAAAGTTGCGTATGTCACCTTCAGTACTCCAGAGGGAGCAGAAACCGCAGTTCTTCTCTCGGGAGCAGTTGTGTGTGGACAGTCTCTAAACATCGAATTGGCTAAGGATTATGCCCTGCCCTCCTCGACTAATTATGCTTTGCCTTCTTCGACCGCATCTCCAACTAGTAACGCTGAGAGTGGGGAATCTGGTTTGAGAAAGGCAGAGGATGTTGTAAGCACCATGTTAGCCAAGGGCTTCATTTTGGGTAAAGATGCATTGAATCGAGCAAAATCCTTTGATGAAAGGCACAGACTTACTTCCACGGCCTCAGCAAAAGTTGCTTCTTTGGACCAGAAGGTGGGATTTACTGAAAAGATCAGTGCTGGTACAGTTATAGTGAATGACAAGGTGAAAGAAATGGATGAGAAATTTCAAGTCTCAGAGAAGACAAAAACTGCAATTTCAGCAGCTGAGCAGTCAGTGTCCAGTGCTGGATCTGCCATAATGAAGAATCGGTATGTGTTGACTGGGGCTACATGGGTCACAGGTGCTTACAACAGGGTTGCAAGGAAGGCTGAGGAAGTGGGGCAGAAAACTAAGGAGAAGGTTTTGGCGCAGAATAATCAAGGAAAAACTGAAGAAAGTCATGTCCACACCAGTATGTCGGAACCCACGACAACTGATCAAACCTCCAAACAGGCAACCACGGTCGATGAACCCTCAAAACCTGAACCTCAACAGGCCACCACAGTTGATCCACCCTCCAAATCTGAAACTCAGAAGGCCACAACAGTTAATGAATCCTCCAAACCTGAACCTCAAGTGGCCACCACAGTTAATGAACCCTCCAAACCTGAACCTCAAGTGGCCACCACAGTTAACGAACCCTCCAAACCAGAACCTCAACAGGCAACCAAGGATGGTCAATCTGCCAGTCCAACAAAATCTAGTGCCTGA 1065 0.4648 MSMRSVKVSNISSGATEQDLREFLTFPGKIEHVEMGSDKGSSKVAYVTFSTPEGAETAVLLSGAVVCGQSLNIELAKDYALPSSTNYALPSSTASPTSNAESGESGLRKAEDVVSTMLAKGFILGKDALNRAKSFDERHRLTSTASAKVASLDQKVGFTEKISAGTVIVNDKVKEMDEKFQVSEKTKTAISAAEQSVSSAGSAIMKNRYVLTGATWVTGAYNRVARKAEEVGQKTKEKVLAQNNQGKTEESHVHTSMSEPTTTDQTSKQATTVDEPSKPEPQQATTVDPPSKSETQKATTVNESSKPEPQVATTVNEPSKPEPQVATTVNEPSKPEPQQATKDGQSASPTKSSA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0184 354 MobiDBLite consensus disorder prediction 88 104 - -
Vra2g0184 354 MobiDBLite consensus disorder prediction 237 354 - -
Vra2g0184 354 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 262 - -
Vra2g0184 354 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 70 IPR000504 GO:0003723
Vra2g0184 354 MobiDBLite consensus disorder prediction 229 354 - -
Vra2g0184 354 SUPERFAMILY RNA-binding domain, RBD 3 81 IPR035979 GO:0003676
Vra2g0184 354 SMART rrm1_1 5 74 IPR000504 GO:0003723
Vra2g0184 354 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Vra2g0184 354 PANTHER BINDING PARTNER OF ACD11 1 1 262 - -
Vra2g0184 354 MobiDBLite consensus disorder prediction 88 107 - -
Vra2g0184 354 Gene3D - 1 81 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0184 Vra-Chr2 1401639 1404409 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0184 - - vun:114170544 549.28