Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0176 ATGTCTCTCTCTTTGCTTCCTGTCTACTCTTCACCTCATCTCTCCTCCTCTCTTTTCTTTCCTACACCACACCTTTCTCTCCTTTGTCTCCCAAAATTCTCAAATGCCCCAACTCCCCAATTTATTCTATGCTGCCGAAGGAACGCTTCATTTTCCGCCCGATGTGGGCCTGGAGTCCCCGATGGTGCTCAATATGACAGTGGTGTTGAAGAAGACGAGCGACCCATGAAGGCTAGCTGCGATGACGAAGAAGAAGAAGAAGGCCAAGAGACTCTTAGCTCCTTAGTTTTGCCCGAAAGATGGGATGTCTTGGGTCTCGGTCAAGCCATGGTGGACTTCTCTGGCATGGTCGATGATAATTTTCTGAAGAATTTGGGGTTGGAGAAGGGAACACGGAAAGTGGTAAATCATGAGGAAAGAGGTAGAGTTTTACAGGCTATGGATGGGTGTAGCTATAAAGCTGCGGCAGGTGGATCTCTCTCTAATACCTTAGTTGCCCTTGCAAGGCTTGGAAGTCGCTCCCTCAAAGTTCCTGCTGTAAGTGTGGCAATGACCGGTAGTGTAGGGAGTGATCTGTTGGGGGGTTTCTACAGGGAAAAATTGCGCCGAGCAAATGTGCAATTTCTTTCCGAGCCTATCAAGGATGGGACTACTGGAACAGTTATAGTTCTCACAACTCCAGATGCCCAGCGAACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTATGATGCATCCTTGGCTAGTGCAGTTTCCAAGACCAACATACTTATTGTTGAAGGGTATTTATTTGAACTTCCTGATACTATTAAAACAATAACTAAAGCATGTGAAAATGCTCGGAGGAATGGTGCCTTGGTTGCAATAACAGCTTCAGATGTTTCCTGCATTGAGAGACACTTTGATGATTTTTGGGAAATTATTGGGAACAGTGTTGATTTAGTCTTTGCAAATGGTGATGAGGCCAGAGCTCTTTGTAACTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCACTTTGTTCCTCTGGTATCCGTTACAGATGGTCCTAGAGGCTCTTACATAGGTGTAAAAGGAGAAGCCGTATATATCCCTCCTTCTCCATGTGTTCCAGTGGATACTTGTGGTGCTGGTGATGCATATGCATCTGGTATTCTATATGGTCTTTTAAGAGGCATATCAGATTTGAGAGGTATAGGCACATTAGCAGCTAATGTTGCTTCTACTGTTGTTGGACAACAGGGAACACGCCTGAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTCGAATTTCAACTCGATTCCTCTTCGGTTGGCACTGATCATATTTCCAGCGTCTAA 1362 0.4493 MSLSLLPVYSSPHLSSSLFFPTPHLSLLCLPKFSNAPTPQFILCCRRNASFSARCGPGVPDGAQYDSGVEEDERPMKASCDDEEEEEGQETLSSLVLPERWDVLGLGQAMVDFSGMVDDNFLKNLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSLKVPAVSVAMTGSVGSDLLGGFYREKLRRANVQFLSEPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLASAVSKTNILIVEGYLFELPDTIKTITKACENARRNGALVAITASDVSCIERHFDDFWEIIGNSVDLVFANGDEARALCNFEAKESAASAARYLSHFVPLVSVTDGPRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGLLRGISDLRGIGTLAANVASTVVGQQGTRLRISDAVKLAESFEFQLDSSSVGTDHISSV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0176 453 Pfam pfkB family carbohydrate kinase 152 424 IPR011611 -
Vra2g0176 453 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 73 446 - -
Vra2g0176 453 CDD adenosine_kinase 100 425 - -
Vra2g0176 453 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 379 392 IPR002173 GO:0016773
Vra2g0176 453 SUPERFAMILY Ribokinase-like 101 424 IPR029056 -
Vra2g0176 453 PANTHER HEXOKINASE FAMILY MEMBER 73 446 - -
Vra2g0176 453 Gene3D - 97 431 IPR029056 -
Vra2g0176 453 MobiDBLite consensus disorder prediction 62 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0176 Vra-Chr2 1352505 1356732 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0176 - - gmx:100816996 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0176 2 1352505 1356732 Vra2g0176 2 1352505 1356732 ECH