Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0161 ATGGCGAATTTCAAGGTTTTCGTTGGGTATGATCCACGCGAAGACATCGCTTATGAGGTTTGTCGCCACTCCATCTTGAAGAAAGCTTCGATCCCAGTTGAAATCATACCCATCAAGCAATCAGAATTGAGAAAAAATGGGTTGTATTGGCGTGAAAAGGACCAGTACGAGAGCACGGAATTCTCGTTTTCGAGGTTCTTGACTCCAAAATTGGCCAACTACGAAGGCTGGGCAATGTTTGTGGACTGTGATTTCCTCTACCTTGCAGATATCAAAGAGCTGAGAGATTTGATCGATGAGAAGTATGCTGTGATGTGTGTGCAACATGAATATGTTCCAAAGGAGGCAACGAAAATGGATGGGGCGGTGCAAACAGTGTACCCCAGAAAGAATTGGTCTTCGATGGTGTTATACAATTGTGGGCATCCGAAGAACAGTGTTCTGACTCCTGAAGTTGTGAACACAGAAACAGGGGCTTTTCTGCACAGGTTTCAGTGGCTGCAAGATGATGAAATTGGGTCGATTCCTTTTGTTTGGAACTTCCTTGAGGGGCATAACAAGGTTGTCGAGAATGACCCTAGCACTTTTCCGAAGGCTATTCATTATACTCGTGGAGGACCATGGTTTGAAGCTTGGAAGAATTGTGCTTTCGCTGACCTCTGGCTGAAAGAAAGGGATGAGTACCAGAACGAGGCCAAAAAAGCTATCACAAATTAA 717 0.4463 MANFKVFVGYDPREDIAYEVCRHSILKKASIPVEIIPIKQSELRKNGLYWREKDQYESTEFSFSRFLTPKLANYEGWAMFVDCDFLYLADIKELRDLIDEKYAVMCVQHEYVPKEATKMDGAVQTVYPRKNWSSMVLYNCGHPKNSVLTPEVVNTETGAFLHRFQWLQDDEIGSIPFVWNFLEGHNKVVENDPSTFPKAIHYTRGGPWFEAWKNCAFADLWLKERDEYQNEAKKAITN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0161 238 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 236 IPR029044 -
Vra2g0161 238 PANTHER EXPRESSED PROTEIN 3 236 - -
Vra2g0161 238 Coils Coil 218 238 - -
Vra2g0161 238 SUPERFAMILY Nucleotide-diphospho-sugar transferases 6 228 IPR029044 -
Vra2g0161 238 PANTHER - 3 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0161 Vra-Chr2 1240519 1241968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0161 - - gmx:100780640 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0161 2 1240519 1241968 Vra2g0161 2 1240519 1241968 ECH