Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0159 ATGGACACGCTGGCACGCATCTCGAACAACACTCCCATCTCATGCATCCACCCGTTTCGTTCCCAATCCCCTCACTTCCCAACCTCTTTCGCCATAATCCGGGTCGGGCGCGGGTCGCTGACTCCAATTCGGGCGTCCACCACGAGCACGGAGAGAGGAGAAGTTGTATTGCCACCGCAACGCCAGGACGACAAGCAACTGCAGAAGGGAATAGCCGAGTTCTACGACGAGTCCTCTTCCATATGGGAGGATATTTGGGGCGACCACATGCACCATGGCTTCTACGACCCGGATTCCACCGTTTCGGTTTCGGATCATCGCGCGGCTCAGATCCGAATGATCGAAGAGTCGCTTCGTTTTGCCTCTATATCTGAGGAGCGTACGAAATGGCCGAAGAGAATAGTTGATGTTGGATGTGGCATAGGAGGCAGTTCCAGATACTTGGCCGAGAAATTTGGGGCAACCAGCGTTGGCATCACTCTCAGTCCTGTTCAAGCTCAAAGAGCTAATGCTCTTGCTGCAGCTCAAGGATTGGCTCAGAAGGTTTCTTTTCAGGTTGCTGACGCTCTGCAGCAACCATTCTCTGATGGGCAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAACTAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGGCACCATAATAATCGTAACATGGTGCCACAGGGATCTTGGTCCTGAAGAACAATCCCTACAACCATGGGAACAAGATCTGTTGAAAAAGATTTGTGATGCGTTTTATCTTCCAGCCTGGTGCTCAGCTGCTGATTATATCAAATTGCTTCGGTCCTTGTCACTTCAGGACATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCCCCATTTTGGCCTGCAGTGATACGCTCAGCCTTGACATGGAAGGGTCTCACTTCACTCTTGAGCAGTGGACAAAAAACGATAAAAGGAGCTTTGGCCATGCCATTGATGATAGAAGGATACAAGAAGGGTCTCATTAAGTTTGCGATCATTACATGTCGAAAACCTGAATAA 1059 0.4995 MDTLARISNNTPISCIHPFRSQSPHFPTSFAIIRVGRGSLTPIRASTTSTERGEVVLPPQRQDDKQLQKGIAEFYDESSSIWEDIWGDHMHHGFYDPDSTVSVSDHRAAQIRMIEESLRFASISEERTKWPKRIVDVGCGIGGSSRYLAEKFGATSVGITLSPVQAQRANALAAAQGLAQKVSFQVADALQQPFSDGQFDLVWSMESGEHMPDKTKFVGELARVAAPGGTIIIVTWCHRDLGPEEQSLQPWEQDLLKKICDAFYLPAWCSAADYIKLLRSLSLQDIKSEDWSRFVAPFWPAVIRSALTWKGLTSLLSSGQKTIKGALAMPLMIEGYKKGLIKFAIITCRKPE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0159 352 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 58 352 IPR025774 GO:0008168|GO:0032259
Vra2g0159 352 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 59 346 - -
Vra2g0159 352 Gene3D Vaccinia Virus protein VP39 76 351 IPR029063 -
Vra2g0159 352 PANTHER METHYLTRANSFERASE 59 346 - -
Vra2g0159 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 351 IPR029063 -
Vra2g0159 352 Pfam Methyltransferase domain 135 233 IPR013216 GO:0008168
Vra2g0159 352 CDD AdoMet_MTases 133 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0159 Vra-Chr2 1231419 1234452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0159 132 237 Acyl Lipid Metabolism Gene Families AT1G73600 36.792 1.13e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0159 K05928 - gmx:732543 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0159 2 1231419 1234452 Vra2g0159 2 1231419 1234452 ECH