Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0158 ATGACATTGAATGTCAACTTCATTGTGCAAGTGAGTGTTTGGATATGCATTATTACGCAGAGTGACTTGACAAGATCTGCTTATAAAAGATGGCATCGTATCAGTTTCTCACTCAAATTTTCTTCAACGAAGAAGGAGATGGCAGTGGAAAAGCATGAGAAGCTGCAGAAGGGAATCGCTGAGTTCTACGACGAGTCGTCTACCATATGGGAGAACATTTGGGGCGACCACATGCACCATGGCTTCTACGATCCGGATTCTACCGTTTCGGTTTCGGATCATCGTGCTGCTCAGATCCGAATGATCGAAGAGTCGCTCCGTTTCGCCTCGCTTTCTGAGGAGCGTACGAAATGGCCGAAGAGAATAGTTGATGTTGGATGTGGCATAGGGGGCAGTTCCAGATACTTGGCCGAGAAATTTGGGGCAACCAGCGTTGGCATCACTCTCAGTCCTGTTCAAGCTCAAAGAGCTAATGCTCTTGCTGCTGCTCAAGGATTGGCTCACAAGGTTTCTTTTCAGGTCGCTGACGCTCTGCATCAACCATTCCCTGATGGACAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAACTAAGTTTGTCGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGGCGCCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGACGAACAATCCCTAAAACCATGGGAGCAAGATCTGTTGAAGAAGATTTGTGATGCATTTTATCTTCCAGCCTGGTGCTCAGCTGCTGATTACATCAAATTGCTTAAATCACTGTCACTTCAGGATATCAAGTCAGCAGATTGGTCTCCCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGTTCTGCGTTAACATGGAATGGCCTCACTTCACTTTTGCGCAGTGGAGTGAAAACCATTAAAGGAGCTTTGGCTATGCCATTGATGATAAAAGGATACAAGAAGGGTTTGATTAAGTTCGTGATCATAACATGTAGAAAGCCTGAATAA 1023 0.4614 MTLNVNFIVQVSVWICIITQSDLTRSAYKRWHRISFSLKFSSTKKEMAVEKHEKLQKGIAEFYDESSTIWENIWGDHMHHGFYDPDSTVSVSDHRAAQIRMIEESLRFASLSEERTKWPKRIVDVGCGIGGSSRYLAEKFGATSVGITLSPVQAQRANALAAAQGLAHKVSFQVADALHQPFPDGQFDLVWSMESGEHMPDKTKFVGELARVAAPGGAIIIVTWCHRDLGPDEQSLKPWEQDLLKKICDAFYLPAWCSAADYIKLLKSLSLQDIKSADWSPFVAPFWPAVIRSALTWNGLTSLLRSGVKTIKGALAMPLMIKGYKKGLIKFVIITCRKPE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0158 340 PANTHER METHYLTRANSFERASE 50 334 - -
Vra2g0158 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 54 339 IPR029063 -
Vra2g0158 340 Pfam Methyltransferase domain 123 221 IPR013216 GO:0008168
Vra2g0158 340 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 45 340 IPR025774 GO:0008168|GO:0032259
Vra2g0158 340 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 50 334 - -
Vra2g0158 340 Gene3D Vaccinia Virus protein VP39 64 338 IPR029063 -
Vra2g0158 340 CDD AdoMet_MTases 121 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0158 Vra-Chr2 1220750 1226890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0158 120 225 Acyl Lipid Metabolism Gene Families AT1G73600 37.736 2.00e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0158 K05928 - gmx:100792443 529.635