Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0150 ATGGCGTCCTCTCTCATTGCAAAGCGATTTTTCTCCTCTTCTCTCCTCTCCAAGTCTATCATTCGTCCCGCCGCTTCAGCCTCTCGCTCGTTCAACACCAACGCCATGCGCAACTACGACGACCGGAACGACGACCTCGAACGTCGCTCAGAATTCTCTTCCCCTCGTACCGCGCGACGTGACGATATCTTCTCAGGTAACGTGCTGGATCCGTTTTTTCCTACTCGGAGTTTGAGCCAGGTTCTGAACATGATGGATCAGTTCATGGACAATCCGTTCCTTTCTGCGCCTCGCGGTATCGGAGCCGGAGCCGGAGCTCGTCGCGGATGGAACGCGAGAGAGACAGAAGATGCTCTGCTTCTCCGCGTGGACATGCCTGGGCTTGGCAAAGAAGACGTGAAGATCTCCGTGGAGCAGAACACTCTAACTATCAAAGGTGAAGGTGCCAAAGAAGGCGACGAGGAAGAGAGCGCTCGTCGCTATACCAGCAGGATTGACTTGCCGGATAAGGTTTACAAGGTAGATCAGATCAAAGCTGAGATGAAGAATGGTGTGCTGAAGGTTGTTTTGCCTAAAATGAAGGAGGAGGAGAGAAGAGATGTGATCAATGTCAGTGTTGAATAA 624 0.5192 MASSLIAKRFFSSSLLSKSIIRPAASASRSFNTNAMRNYDDRNDDLERRSEFSSPRTARRDDIFSGNVLDPFFPTRSLSQVLNMMDQFMDNPFLSAPRGIGAGAGARRGWNARETEDALLLRVDMPGLGKEDVKISVEQNTLTIKGEGAKEGDEEESARRYTSRIDLPDKVYKVDQIKAEMKNGVLKVVLPKMKEEERRDVINVSVE* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0150 207 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 207 IPR044656 -
Vra2g0150 207 MobiDBLite consensus disorder prediction 36 57 - -
Vra2g0150 207 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 207 - -
Vra2g0150 207 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 101 207 IPR002068 -
Vra2g0150 207 Pfam Hsp20/alpha crystallin family 113 206 IPR002068 -
Vra2g0150 207 Gene3D - 19 206 IPR008978 -
Vra2g0150 207 MobiDBLite consensus disorder prediction 38 57 - -
Vra2g0150 207 SUPERFAMILY HSP20-like chaperones 78 199 IPR008978 -
Vra2g0150 207 CDD ACD_sHsps-like 113 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0150 Vra-Chr2 1164330 1165393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0150 K13993 - gmx:547852 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0150 2 1164330 1165393 Vra2g0150 2 1164330 1165393 ECH