Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0145 ATGGCGCTTAAAACCCTATCCAGTTTTCTCTCACCTCTCTCTCTTCCCAAATCTAAATTCCCGCAACATTTACTCACCACCAAGCATGGCCTCGTTCTCTGCGAACTCTCACGCTCTCAGAAATCGCGTTTGCCCGCCGACGAGTCGGAAGGTACCGGCGCCGCCGCTCCGTCGCCCGGAGAGAAGTTTCTCGAACGCCAACAGTCGTACGAAGCTGCCAAGCTCATCCTCAAAGAAAATAAGAAGAGGAAAAAGAAGGAAGATAACGCTGTAAAAGCTTCTCGAAACGTCGCTTCCTGCTACGGCTGCGGCGCTCCGTTGCACACTTCCGATGCCGTCGCCCCTGGATACGTTGATCCTGAAACCTATGAATTGAAGAAGAAACACCACCAGCTAAGAACCGTTCTGTGTAGACGGTGCAAGCTTTTGTCGCACGGCGAGATGATAACTGCCGTTGGAGGACACGGAGGATACCCTGGCGGTAAATTATTCGTTACCGCTGAAGAGCTTCGAGAGAAGTTGGCTCACTTGCGTCACGAGAAAGCTCTTATTGTCAAACTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTGCGAGATCTTGCTGGTTCTAACCCAATTATACTGGTGGTGACTAAGGTTGACCTCCTTCCAAGAGATACTGATCTTAACTGTGTAGGGGATTGGGTTGTAGAGGCTACCATGAGAAAGAAGCTGAATGTTCTCAGTGTTCACCTCACTAGTTCCAAATCATTGGTTGGAGTAACTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGAGATGTTTACATTCTGGGTTCAGCAAATGTTGGCAAATCCGCCTTCATCAATGCTTTATTAAAAACAATGGCTATAAATGATCCCGTGGCTGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACTACCCTAGGGCCAATTCAAATTAATGCTTTTCTAGGAGGAGGGAAATTGTATGACACTCCCGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCAATCTAAAGATCTACCTTCCCTTGCTCCTCGGAGCCGATTGAGGGGCATTTCTTTCCCGAGGTCTTCGGTATCTGCGGACAATGTAGAGCAAGTAGCTTCCACAGAGAATGGCTTGAATGCATTTTCAGTTTTCTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGGCCCAAGGGACTGCATATGCATATGGTACCCACAGAGAAAGCAGATGAATTTTATCAGAAAGAACTTGGTGTCCTCTTGACTCCACCAAGTGGAGGAGAAAATGTTGAAAGCTGGAAAGGACTTGAATCAGAACGTAAATTGCAAATAAAATTCGAAGATGTGGAAAGACCAGCTTGTGATATAGCTATATCAGGTCTAGGGTGGTTTACTGTCGAGCCAGTTGGTAGGTCACGCAAAATCTCGCAATCAAAACCTGTTGAGACTACTGAGGAATTGATTTTGGTCGTGCGAGTCCCCAAACCTGTTGAGATTTTTGTGAGGCCACCGATACCAGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATGTAGAATTAACAGAGAAAGAAGAGGAAATGAGACCCAAATGGTACTTTTGA 1668 0.4604 MALKTLSSFLSPLSLPKSKFPQHLLTTKHGLVLCELSRSQKSRLPADESEGTGAAAPSPGEKFLERQQSYEAAKLILKENKKRKKKEDNAVKASRNVASCYGCGAPLHTSDAVAPGYVDPETYELKKKHHQLRTVLCRRCKLLSHGEMITAVGGHGGYPGGKLFVTAEELREKLAHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLNCVGDWVVEATMRKKLNVLSVHLTSSKSLVGVTGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQTAVVQSKDLPSLAPRSRLRGISFPRSSVSADNVEQVASTENGLNAFSVFWGGLVRIDVLKVLPETCLTFYGPKGLHMHMVPTEKADEFYQKELGVLLTPPSGGENVESWKGLESERKLQIKFEDVERPACDIAISGLGWFTVEPVGRSRKISQSKPVETTEELILVVRVPKPVEIFVRPPIPVGKAGAEWYQYVELTEKEEEMRPKWYF* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0145 555 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 167 343 IPR030378 GO:0005525
Vra2g0145 555 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 35 555 IPR044229 GO:0003924
Vra2g0145 555 Pfam 50S ribosome-binding GTPase 274 345 IPR006073 GO:0005525
Vra2g0145 555 Gene3D - 168 344 IPR027417 -
Vra2g0145 555 CDD YqeH 137 340 - -
Vra2g0145 555 MobiDBLite consensus disorder prediction 42 62 - -
Vra2g0145 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0145 Vra-Chr2 1131992 1138727 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0145 K13427 - gmx:100781340 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0145 2 1131992 1138727 Vra2g0145 2 1131992 1138727 ECH