Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0140 ATGCATAACTTGCAAATCTGTGTTTCTTCAATGGAGTTTTGTAATCGAATTATCCTCAAACATGTTTCCATTTTACTGGTTATTTTCCTTAGTTGTTCGACCTCTAAAACTGTCACTCCCTCGCTTCTGGACTTGGTGGTTACTAACACCACAGTCCTACACCGCAATTTCACTGCACTATCAGAATTCAGAATGATAAACAGACGAATTTTGAAAGATTGCTCTGCTTCAAATCCCTTCCTCAAAGTGAATGTCGACTCAAATTCCACTCTATCGGATGACGAGTTTGTGAGAGTTACAGTCACAGGGGTTTCCAATCCTTCAGACGGTGATTGGGTTGCCATGATCTCACCTTCAAATTCTGATGTGAAATCTTGTGTGCTGAATGAGTTGTTCTATCTACAAACTGGTGATACGGCCAAACTTCCTCTGTTATGTCACTACCCTGTCAAGGCACAGTACATGAAAAATGATCCAAACTACCTCAGTTGCAAAAACAAAGAATGCAAGAAATACCAAGATGGGAAATGCGTTATCTCAACGTGCAGTGGTTCAATACAATTTCATGTCATCAATATTAGAAGTGACATTGAGTTCGTGTTCTTCTCTGGTGGATTCCTGAAACCCTGCCTTGTAGGAAGGTCCACGCCCTTGAGTTTTGCTAATCCCAAGAGGCCACTCTATGGCCATTTATCAAGTATAGATTCAACTGGAGCATCAATGAGATTGACATGGGTTAGTGGAGACGAGGAGCCTCAGCAAATCCAATATGCAAATGGAAAAGCAGTTACTTCAACAGTCACTACATTCTCACAAGCTGATATGTGTAGTTCAGCGCTGCCCAGTCCTGCTAAGGACTTCGGATGGCATGATCCGGGATACATTCATTCAGCACTTATGACAGGACTAAATCCTTCAAGCCCATTTTCCTACAAATATGGAAGTGACTCGGTTGGTTGGAGTAAAGAAATTCAGTTTTCAACTCCACCAGCTGGAGGATCGGATGAGGTCAGATTCATTGCATTTGGTGATATGGGCAAAACTCCTCTCGATGCTTCCAAAGAACACTACATTCAGCCCGGAGCTCTTTCAGTGATTAAAGCTATAGCCAAAGACGTAAATTCCAAAAAAGTAAATTCAGTGTTTCACATCGGAGACATAAGCTATGCGACAGGTTTTCTAGCAGAATGGGATTTCTTCCTTCACCTTATCAACCCAGTAGCTTCCAGGCTTTCTTATATGACAGCAATAGGGAATCATGAGAGGGATTACGTAGATTCTGGTTCAGTATATATTACTCCTGACTCTGGTGGGGAATGTGGAGTACCGTATGAAACATATTTCCCAATGCCAACTTCAGCAAAGGATAAGCCTTGGTACTCTATAGAACAAGGAAGTGTTCATTTCACAGTAATATCAACTGAGCATGATTGGTCAGAAAATTCTGAGCAGTATGCGTGGATGCAAAAGGACATGGCATCGGTTAATCGACAGAAAACTCCTTGGCTAATCTTCATGGGACATAGACCGATGTACACTTCTCACCAGGGATTGTTATCGTCTGAAAACAAATTTAATGAAGCTGTGGAGCCATTGCTATTTCAAAATAAGGTTGACTTGGCTCTTTTCGGCCATGTACATAATTATGAGAGAACTTGTTCCGTGTTTCAACATAAATGTAAAGCCATGCCTACAAAAGATAAAAATGGAATGGATACATATGATGGCCGAAATTACAGTGCTCCAGTGCAAGTTGTCATTGGCATGGCTGGCTTCACCTTGGACAACTTTTCAAGCAATGTTGAGAGCTGGAGCCTGAAAAGGATTTCCGAATTTGGTTATCTAAGAGCACATGCTACAAGGAAGGACTTAAGCCTAGAGTTTGTCGTCTCAAATACAAAAGAAGTTATGGACAGTTTCCACATTACAAAGTGA 1935 0.4134 MHNLQICVSSMEFCNRIILKHVSILLVIFLSCSTSKTVTPSLLDLVVTNTTVLHRNFTALSEFRMINRRILKDCSASNPFLKVNVDSNSTLSDDEFVRVTVTGVSNPSDGDWVAMISPSNSDVKSCVLNELFYLQTGDTAKLPLLCHYPVKAQYMKNDPNYLSCKNKECKKYQDGKCVISTCSGSIQFHVINIRSDIEFVFFSGGFLKPCLVGRSTPLSFANPKRPLYGHLSSIDSTGASMRLTWVSGDEEPQQIQYANGKAVTSTVTTFSQADMCSSALPSPAKDFGWHDPGYIHSALMTGLNPSSPFSYKYGSDSVGWSKEIQFSTPPAGGSDEVRFIAFGDMGKTPLDASKEHYIQPGALSVIKAIAKDVNSKKVNSVFHIGDISYATGFLAEWDFFLHLINPVASRLSYMTAIGNHERDYVDSGSVYITPDSGGECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYAWMQKDMASVNRQKTPWLIFMGHRPMYTSHQGLLSSENKFNEAVEPLLFQNKVDLALFGHVHNYERTCSVFQHKCKAMPTKDKNGMDTYDGRNYSAPVQVVIGMAGFTLDNFSSNVESWSLKRISEFGYLRAHATRKDLSLEFVVSNTKEVMDSFHITK* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0140 644 SUPERFAMILY Metallo-dependent phosphatases 337 638 IPR029052 -
Vra2g0140 644 PANTHER PURPLE ACID PHOSPHATASE 16 644 - -
Vra2g0140 644 Pfam Fn3-like domain from Purple Acid Phosphatase 90 222 IPR040974 -
Vra2g0140 644 Pfam Iron/zinc purple acid phosphatase-like protein C 581 639 IPR025733 -
Vra2g0140 644 SUPERFAMILY Purple acid phosphatase, N-terminal domain 215 330 IPR008963 GO:0003993|GO:0046872
Vra2g0140 644 PANTHER PURPLE ACID PHOSPHATASE-RELATED 16 644 - -
Vra2g0140 644 Gene3D - 333 644 IPR029052 -
Vra2g0140 644 Gene3D - 226 332 - -
Vra2g0140 644 CDD MPP_PAPs 336 644 IPR041792 -
Vra2g0140 644 Pfam Calcineurin-like phosphoesterase 338 549 IPR004843 GO:0016787
Vra2g0140 644 Pfam Purple acid Phosphatase, N-terminal domain 230 328 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0140 Vra-Chr2 1098942 1108287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0140 95 642 Miscellaneous Gene Families AT2G03450 31.250 1.37e-69 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0140 K22390 - gmx:100802505 1149.42