Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0136 ATGGCAGAGAGTGTAGTTTCCTTTGTTTTAGATCACTTAGGTGAGCTTGCCGCACGCGAAGCTAACTTGTTGTATGGCGTGGAGGATAGAGTCCAGTCCCTCCATTACGAACTTCAAATGATCAAAGAGCTTCTCAATACCACCAAGAGAAAGAAGGGAATGGAACACATTGTATTGAACCAAATCAGAGATGTGGCCCACTTAGCTGAGGATGTCATCGATACATTCGTAGCCAAAGTTTCCATTTACAAGAGGAGAACCATTCTCGGGAGGATGCTCCATGGCTTTGGCCAAGCAAGGTTGCTTCACCATGTAGCCCACAAAATAGACAATATCAGAACCACTCTCAATGAGCTACGCGACAACAGGGACAAATATGATGCTTTCAAAGAAACTAATAATCAATCTGCAACAGAAGAGGAGGAGAAGGAAAGGTTTCAATCGCTGCACAAGCTTAGAAGAGACGTGGAGGAAGAACATGTGGTTGGCTTTGTCCAAGACTCCAAAGATGTCATCAAACAACTCCTGGAAGGTGGTTCAAATCGTAAAGTTGTCTCTATCGTTGGCATGGGGGGATTGGGGAAGACCACCCTTGCCCGAAAGGTCTACAATAACAATCAAGTGAAGCAATGCTTCAAGTGTCGTGCATGGGTTTATGTGTCCAACGAGTGCAGAGTTAAGGAGCTTTTGCTTGGTCTTCTTAAGCATTTGATGCCAAAATTTGAACAGCAACGCAGAGGCAACAAAAAAGGTATGAAAAGTGCTGGAGATATTAGTAGCCTGAATGAGGAGGAGCTGAAAAAACTGGTGCGGAACTGCTTGGAGTGGAAAAGGTATCTTGTGGTGGTAGATGACCTGTGGAAAAAGCAAGATTGGGACGAGGTGCAAGATGCTTTTCCAAACAACGATAGAGGCAACAGAATATTGCTCACTAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGGTCATGATGTCCCTCACTATCTTCAATTCCTGAATAAAGAAGAAAGTTGGGAGTTGTTTCGCAGGAAGGTGTTTAGGGGTGAAAACTACCCTTCTGATTTGGAGCCACTTGGACAACATATTGTTCAAAGTTGTCAAGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGGTTGCTAGCCAACAGGGAAAAGTCATATAGAGAATGGTCTAAAGTTGTGGGTCATGTTAATTGGTATTTGACTCGAGATGAGACCCAAGTGAAAGATATAGTTCTCAAGCTTAGCTACGACAACTTGCCAAAGAGACTAAAACCATGTTTTCTCTATCTTGGGTTATTTCCTGAAGACTTAGAAATACCTGTTATGCCATTATTACAAAAATGGGTAGCAGAGGGTTTTATACAAGATACAGGGAATAGAGACCCAGATGATATTGCAGAAGACTACTTGTACGAACTCATCGATCGTAGTTTGGTTCAAGTAGCAAGAGTGGAAATGAATGGAGGTTTGGAGACGTGTCGGGTTCATGATCTTCTTCGAGACCTTTGCATATCAAAGAGCAAAGAGGACAAAGTTTTTGAGGTTTGCACAGATAACAACATTCTAATTCCGACCAAACCTCGTAGATTGTCCATTCACAGTAAGATGGCTCACTACATTTCTTCAAGCAATAATGACCATTCATGTATCCGTTCCCTGTTATTCTTTGGTCCAGATTACTGTGTTGATAGGAGAGAATGGAAATGGCTTTTGGAAGGCTTCAAATTGGTTCGGGTGTTAGAGCTCGAACCAAAGAGGTGCGGAAAGATCCCTTCAAAGTTAGGAAAATTTATCCACTTAAGATACTTGAGAATAGACTCGGAGGAGGTTAAGTTTGTTCCAGCTTCAATACTTGATCTTTGGAATCTACAAACCATAGACTTAGGTCCTTGGAGTCATGACATTCCAATTTCTTTCCCTTTACAAATATGGAAGCTCAAACATTTAAGACATTTAAATTCACGACGACCTATCAAGCTGCGAGGCAGTAGTTCAGGATCAAATGAAAAGATGTGGAATCTTCAAACCATTTCTCCTCTTGAACTCAACAAGCAAACAACATTTCTGGTAAAGAATGAAACATTTCCCAATCTTAAGAGGATGGGGTTGAAAGTAGATTCTGGATGCAAAGGTGAATTACCCAATTTGTTGGAGAGCCTACAACAATTAAGTCATCTGAATAAGTTAGAGATTCTCCTCCCAGATAGTTATGATGCAAGTTTAAATGTAGAGGGTTCAGTCCATGAAAGTGTGGAAAGGAACAATGGTTGCAAGCCACAAGAACTGTTACAAAACCTAGGACAATTCAATTATCTATCTGTCTTAAAGATTGAGAATGCTTTGAACCTTCTAATAAGTGCAGTCACATTTCCTCCAAACATTACAGAGTTAAAGTTATCAGGGATTAGCTGCATTAGCGATGAGGGGATAAGTGGTTTGGGAAATCACAGCAAACTCAAAATTTTGAGACTTTTGGGAGATGTAACTTGGTCTGGAGATTCCTCTGTGTTCTATTGTGTCGAAGGTAGTTTCCCAGAGTTGGAAATATTTCGAATGGGTGTTTTGGCAGTTACAAAGTGGAAATTAAGCAATGGTGCAATGCAGAAACTTGAGAGTGTGATGATCCACAATTGTGAAATGTTAGATGATCTTCCAAATGAACTTTGGTCTTTGAGTGGATTAAGAAAAGTACAGATAACTAAACCATCAGAACAAATGGTTCGCATGCTACGAAATTTGAAAATAAACAATGGGATTCAACTTCTCATAGATGCCGAAGAACCTTTTAGTTTTGAAAATAAATTTTAG 2811 0.407 MAESVVSFVLDHLGELAAREANLLYGVEDRVQSLHYELQMIKELLNTTKRKKGMEHIVLNQIRDVAHLAEDVIDTFVAKVSIYKRRTILGRMLHGFGQARLLHHVAHKIDNIRTTLNELRDNRDKYDAFKETNNQSATEEEEKERFQSLHKLRRDVEEEHVVGFVQDSKDVIKQLLEGGSNRKVVSIVGMGGLGKTTLARKVYNNNQVKQCFKCRAWVYVSNECRVKELLLGLLKHLMPKFEQQRRGNKKGMKSAGDISSLNEEELKKLVRNCLEWKRYLVVVDDLWKKQDWDEVQDAFPNNDRGNRILLTSRLKEVALHAGHDVPHYLQFLNKEESWELFRRKVFRGENYPSDLEPLGQHIVQSCQGLPLSIIVLAGLLANREKSYREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPKRLKPCFLYLGLFPEDLEIPVMPLLQKWVAEGFIQDTGNRDPDDIAEDYLYELIDRSLVQVARVEMNGGLETCRVHDLLRDLCISKSKEDKVFEVCTDNNILIPTKPRRLSIHSKMAHYISSSNNDHSCIRSLLFFGPDYCVDRREWKWLLEGFKLVRVLELEPKRCGKIPSKLGKFIHLRYLRIDSEEVKFVPASILDLWNLQTIDLGPWSHDIPISFPLQIWKLKHLRHLNSRRPIKLRGSSSGSNEKMWNLQTISPLELNKQTTFLVKNETFPNLKRMGLKVDSGCKGELPNLLESLQQLSHLNKLEILLPDSYDASLNVEGSVHESVERNNGCKPQELLQNLGQFNYLSVLKIENALNLLISAVTFPPNITELKLSGISCISDEGISGLGNHSKLKILRLLGDVTWSGDSSVFYCVEGSFPELEIFRMGVLAVTKWKLSNGAMQKLESVMIHNCEMLDDLPNELWSLSGLRKVQITKPSEQMVRMLRNLKINNGIQLLIDAEEPFSFENKF* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0136 936 PANTHER DISEASE RESISTANCE PROTEIN RP 44 924 IPR044974 GO:0006952
Vra2g0136 936 Gene3D - 331 416 IPR042197 -
Vra2g0136 936 Gene3D - 417 508 IPR036388 -
Vra2g0136 936 CDD RX-CC_like 2 121 IPR038005 -
Vra2g0136 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 431 IPR027417 -
Vra2g0136 936 SUPERFAMILY L domain-like 495 900 - -
Vra2g0136 936 Coils Coil 139 159 - -
Vra2g0136 936 Pfam Rx N-terminal domain 5 81 IPR041118 -
Vra2g0136 936 Pfam NB-ARC domain 169 419 IPR002182 GO:0043531
Vra2g0136 936 Gene3D Ribonuclease Inhibitor 537 924 IPR032675 -
Vra2g0136 936 Gene3D - 139 325 IPR027417 -
Vra2g0136 936 PRINTS Disease resistance protein signature 184 199 - -
Vra2g0136 936 PRINTS Disease resistance protein signature 273 287 - -
Vra2g0136 936 PRINTS Disease resistance protein signature 366 380 - -
Vra2g0136 936 PRINTS Disease resistance protein signature 866 882 - -
Vra2g0136 936 PANTHER - 44 924 - -
Vra2g0136 936 Gene3D - 5 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0136 Vra-Chr2 1069194 1072408 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0136 - - vra:106779070 1288.09