Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0126 ATGAATCAATCAAACTTCAATGTCTCTTCTCCAACTTTTGTTTCAGGAACAGACCACTCACGTAGGTCTGCAAACTATAAACCAAACATTTGGAAACACCATTTTCTCCAGTCACTTCACAGTAAATATCATAAGGAAGAATTTGTTATGGTGTTAAACAAGCTTGTGATGGAAGTGAAGAGTCTATTTGCACAAGAAACGAATATTTTGGAACAACTAGAGTTGGTTGATTGGATCCAAAAACTAGGCCTTGCCAACCATTTTCAGAAGGAAATCAATGGCTTTCTTGAATCTATTAATCCTAGTGAAGAACAAGATTTGCAAGTATCTGCATTATGCTTCAGGCTTCTCAGAAATCACGGATTTGCAGTTTTGCCTGATATGTTAAGCAAGTTCTTAGATAAAAATGGTAAAGTGAAGAGGACAATCAGCTCACATGCTGGAGATGTTAAGCATGTTGTGGAGCTTCTTGAGGCCTCACATTTAGGATTGGAAGGAGAAAAGATATTGGATAAGGCAAAAATCTGTGCCAGAAATTCTCTGAAGGATATTTTTTCTCTCAGTTCTGTCAACAAGGATCAACTATATGAGACTGTAGATGCTGAAAGAGTGGTCCACTCTCTGCAGCTTCCGTCCCACTGGAGAGTACAGTGGTTTGAAGTCAAATGGCATGTGAAGCAATACAGCAAGGAGAAAAATATGAACCCTGTTTTACTTGAACTATCTAAGTTAAATTTCAATATGATTCAAGCAACACTTCAGTTGGAGTTGAAGGAATTATCCAGGTGGTGGGAAAATCTTGGCATAAAAGAAGAATTGAGCTTTGCAAGGAACAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAGCCAAAGCACAAATCAATCAGAAAATGGCTCACTAAAGTTATTGTTTTCGTATTGGTCATTGATGATGTTTATGATATACATGCCTCGTTTCAAGAGTTGAAACCCTTCACAATGGCGTTTGAGAGATGGGACGACACAGAAGTTGTTGAAGAACTTCCAACGTACATGAAAACTTGCGTCCATGCACTGAAAGATGTTACAAATGAAATTGCTTATGAGATTGGTGGAGAAAATAACTTTCACTTGGTGTTACATTACCTAAAGAAAGCGTGGATAGAGTTTTGCAAAGCATTGTACGAGGAGGCAAAGTGGTACAACAAAGGATACATTCCATCGTTGCAAGAATATTTAAGCAATGCATGGATTTCATCTTCTGGGCCTGTCATTTTACTGCATTCGTATCTTGGTACAATGTATCAAGTAAATGATTCAATGGAACATTTTCTACATACGTACAAGGATTTGGTCTACAATGTATCTCTTGTCATTAGACTTTGCAACGACATTGGAACTACGGTGGCTGAAAGAGAAAGAGGTGATGCTGCTTCATCAATAGTATGCTATATGAAGGAAGAAGGTGTTTCAGAGGAAAAAGCAAGAAAGCATATAGAAGATAAAATCATTGAAGCATGGAAGAAGATAAACAAGTGTTATGGTTGTTGTTCTTCATGTTGGGTGGTGGAACCATTTCTTACTCAAGCAATAAATGCAGCTCGTGTGGGTCATACCCTTTATCAAAATGGAGATGGTTTTGGAATCCAAGATCGAGATATCAAAAAACATATCTTGTCACTAGTTGTTGAACCTCTTTAA 1692 0.3788 MNQSNFNVSSPTFVSGTDHSRRSANYKPNIWKHHFLQSLHSKYHKEEFVMVLNKLVMEVKSLFAQETNILEQLELVDWIQKLGLANHFQKEINGFLESINPSEEQDLQVSALCFRLLRNHGFAVLPDMLSKFLDKNGKVKRTISSHAGDVKHVVELLEASHLGLEGEKILDKAKICARNSLKDIFSLSSVNKDQLYETVDAERVVHSLQLPSHWRVQWFEVKWHVKQYSKEKNMNPVLLELSKLNFNMIQATLQLELKELSRWWENLGIKEELSFARNRLVESFMCAAGVAFEPKHKSIRKWLTKVIVFVLVIDDVYDIHASFQELKPFTMAFERWDDTEVVEELPTYMKTCVHALKDVTNEIAYEIGGENNFHLVLHYLKKAWIEFCKALYEEAKWYNKGYIPSLQEYLSNAWISSSGPVILLHSYLGTMYQVNDSMEHFLHTYKDLVYNVSLVIRLCNDIGTTVAERERGDAASSIVCYMKEEGVSEEKARKHIEDKIIEAWKKINKCYGCCSSCWVVEPFLTQAINAARVGHTLYQNGDGFGIQDRDIKKHILSLVVEPL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0126 563 Pfam Terpene synthase family, metal binding domain 239 506 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vra2g0126 563 Gene3D Farnesyl Diphosphate Synthase 28 553 IPR008949 -
Vra2g0126 563 MobiDBLite consensus disorder prediction 1 20 - -
Vra2g0126 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 562 IPR034741 -
Vra2g0126 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 233 IPR008930 -
Vra2g0126 563 Gene3D - 67 234 IPR036965 GO:0010333|GO:0016829
Vra2g0126 563 PANTHER OS04G0344100 PROTEIN-RELATED 19 563 - -
Vra2g0126 563 SUPERFAMILY Terpenoid synthases 234 563 IPR008949 -
Vra2g0126 563 CDD Terpene_cyclase_plant_C1 21 562 IPR044814 GO:0010333|GO:0016102
Vra2g0126 563 Pfam Terpene synthase, N-terminal domain 30 199 IPR001906 GO:0010333|GO:0016829
Vra2g0126 563 SFLD Isoprenoid Synthase Type I 234 562 - -
Vra2g0126 563 PANTHER ALPHA-FARNESENE SYNTHASE 19 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0126 Vra-Chr2 969096 972614 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0126 K14173 - gmx:100812119 828.55