LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g0125	ATGGTGTTCACGGAGTCGTCTCTTCTCCTTCCGTCCGGTTCGAACAGCAGGAAGAGCAATGCTCCGGAAGACAAATGGGATTTGGCGTACATAGTGTATTTCTTCCTGGGATTCGGTTACCTTCTCCCGTGGAACGCTTTCATCACAGCCGTTGATTACTTCTCCTATCTTTACCCTGACACAAGCGTTGACCGCATCTTCGCCGTCGTTTACATGCTCATCGGCCTCGTCGGAATCTCCCTCATCATCCTGTACAGTCACAGCTCCAAAGCCTTTCTCAGAATCAACCTTGGTTTGGTCCTCTTCGTCGTTTCTCTCCTCATCGTTCCCCTGGTTGACGCCTTCTACGTCAGGGGTCGTGTCGGAGTCATCGGTGGATTCTACGCCGCCGCCTTCGCCGTCGGCCTCTCCGGCGTCGCCGATGCGCTCGTGCAGGGTTCCATTGTTGGCTCCGCCGGGGAGCTGCCGGAGAGGTACATGCAAGCGGTCGTAGCTGGCACAGGCGGTTCTGGGGTGCTTGTTTCTGTCCTGAGGATAATCACAAAAGCTGTTTACCCACAAGATGCCTCTGGCCTACAAAAGAGTGCAAATCTATACTTTTCTGTATCAATTGTGATTGTGTTCATATGCATGGTTTTATACAACTTGGTGCACAAACTTCCTGTTATGAGGTATTATAATGAACTTAAGGTTGAGGCGGCTGCTACAAATGAAGACAGTGGTCCCCCGACTGGAGTTGTCTGGAGGTCGACTTTATGGGATATTGTGGGAAGCATCAAGTGGTATGGATTTGGCATTGTGCTCATTTATGCTGTGACTCTGGCAATTTTTCCTGGTTACATTACCGAGGACGTGCACTCTGAAGTTCTTAAGGATTGGTATCCAATTCTCCTAATTGCTTCCTATAATGTGTTTGATCTGGTTGGCAAGTCTCTGACTGCAGTTTATCTCCTACAGAATGAAAAAGTTGCAATAGGTAGTTGCATAGCAAGATTGCTGTTTTTCCCTCTCTTCTTAGGGTGCTTGCATGGTCCCCAATTCTTCCGGACTGAGATTCCCGTGACGATACTAACTTGCCTCTTAGGGCTTACTAATGGCTACCTAACCAGTGTATTGATGATTATGATTCCTAAAGCTGTAAAGTCACAGCATGCAGAGACTGCAGGGATTGTGAGTGTATTATTCTTAGTTTTTGGTCTGGCTTCTGGGTCTGTTATAGCTTGGTTTTGGGTCATCTGA	1239	0.4802	MVFTESSLLLPSGSNSRKSNAPEDKWDLAYIVYFFLGFGYLLPWNAFITAVDYFSYLYPDTSVDRIFAVVYMLIGLVGISLIILYSHSSKAFLRINLGLVLFVVSLLIVPLVDAFYVRGRVGVIGGFYAAAFAVGLSGVADALVQGSIVGSAGELPERYMQAVVAGTGGSGVLVSVLRIITKAVYPQDASGLQKSANLYFSVSIVIVFICMVLYNLVHKLPVMRYYNELKVEAAATNEDSGPPTGVVWRSTLWDIVGSIKWYGFGIVLIYAVTLAIFPGYITEDVHSEVLKDWYPILLIASYNVFDLVGKSLTAVYLLQNEKVAIGSCIARLLFFPLFLGCLHGPQFFRTEIPVTILTCLLGLTNGYLTSVLMIMIPKAVKSQHAETAGIVSVLFLVFGLASGSVIAWFWVI*	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g0125	412	PIRSF	ENT	4	412	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Vra2g0125	412	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	132	152	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Vra2g0125	412	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	298	319	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Vra2g0125	412	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	388	412	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Vra2g0125	412	PANTHER	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	17	412	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Vra2g0125	412	Pfam	Nucleoside transporter	134	411	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Vra2g0125	412	PANTHER	EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 8	17	412	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra2g0125	Vra-Chr2	964881	967133	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g0125	5	412	Organic Solute Cotransporters	AT1G70330	67.883	0.0	550

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g0125	K15014		-	gmx:100793043	687.567