Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra2g0123 | ATGATGCGAACGCTGTCTACCCAATTTCGTTCCATCAAACGCCCTAATCCAAACCCTAAATTATGCAAATCGTCCTCTCCGACAAAATCAGAACTAAAATTCAATGTCAAACCAAAATCAGAGTCAGATTCATGGTGTGTTTATCTCATCCTCTCCACCAACCATCCAATCAAAACCTATGTTGGGATCACAAACAATTTCCCTCGCCGTTTGAAGCAGCACAACGGGGAACTTAACGGTGGTGCAAAGGCATCCCGTGCTGGAAGGCCTTGGATTTGTGCATGCATTATTTGCGGTTTTGCAGACCGAAGTGAAGCTAGTATATTTGAATCAAAATGGAAAGCTATCTCAAGGAGAGCTCCCCGCAAAAATCAAAATGAACATCTCTCTGAACAAAGTGAAGATCCATCATTACCTCTGCTGCAACACAGACAAACAGCTTTGAAAAAAGTGAAAGGTTCACTCGACTGCACTCACTTAGAATTCATTTGGCATTTGGATCCATTGTGA | 510 | 0.4235 | MMRTLSTQFRSIKRPNPNPKLCKSSSPTKSELKFNVKPKSESDSWCVYLILSTNHPIKTYVGITNNFPRRLKQHNGELNGGAKASRAGRPWICACIICGFADRSEASIFESKWKAISRRAPRKNQNEHLSEQSEDPSLPLLQHRQTALKKVKGSLDCTHLEFIWHLDPL* | 170 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra2g0123 | 169 | PANTHER | STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 | 18 | 168 | - | - | |
| Vra2g0123 | 169 | Pfam | GIY-YIG catalytic domain | 45 | 119 | IPR000305 | - | |
| Vra2g0123 | 169 | ProSiteProfiles | GIY-YIG domain profile. | 43 | 125 | IPR000305 | - | |
| Vra2g0123 | 169 | Gene3D | - | 39 | 150 | IPR035901 | - | |
| Vra2g0123 | 169 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Vra2g0123 | 169 | SUPERFAMILY | GIY-YIG endonuclease | 44 | 118 | IPR035901 | - | |
| Vra2g0123 | 169 | PANTHER | EMB|CAB76036.1 | 18 | 168 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra2g0123 | K15078 | - | gmx:100805152 | 305.064 |