Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0122 ATGGAGGGTGAGATTATGAATCTCATGAAGGTGTGGCTCTCAGTTGTGGTCTCTTTATGCTACTGTTATTGGATCCGAAAGCTTATTCCTGCAGGAACAATACGACTCTTCCTTTTTCTTCCAATCGTCTTCTTATTCATTGTGCTTCCTCTCAGTCTTTCTTCTGTGCACTTATGTGGCACCACAGGGTTCTTCGTTGCCTGGCTAGGAAACTTCAAACTCTTGCTCTTAGCTTTCGACAAGGGACCTCTCTCCTCCGACGCATTCATCTCTCTTCCACGTTTTGTAGCAGTGGCATGTCTCCCCATCAAGATCCAGAAAAACCCACCACGTTCTACCACCATCCAATGTTCTTCAGCTCAAAATGGTAAAACCCCACATCCAGATTCGTCCAAAAGATCCGGTTTTGACACCAACCCATCTTCAATAAAGCCAAACTCTGTTACCAAACAAAACTTGTCCGGGGTATCATCCAAAAAGGCCGGTGGTACCCCACTTCTAGGGTATGCCCTGAAGGGTATTGCCGTGGCCATTTTGGTGAAGATCTATGACTACAGTGAGAGTATCAATCCGAATGTCCTTATGTGCATGTACTGTTTCCACATTTACTTCATGTTGGAAATAATCTTGGCGGTGGTTGCAGCGGCGGCGAAAGCCATGCTGGGGATGGAGCTGGAGCCGCAGTTCAAAAATCCACTGCTCTCGACCTCACTCCAAGATTTCTGGGGAAGGAGATGGAATCTCATGGTCACAAGCATCCTCCGACCAACGGTGTACGAACCGACCATGAAAGCAGCATTGAAGGTTGTTGGTCCCACGTGGGCCCCATTACCGGCAGTGATGGGCACCTTCGTGGTGTCGGGTTTGATGCACGAGTTGATACTGTTCTATCTAGGGAGATCAGAGCCCACCTTCAGAATGACGTGCTTCTTTCTCCTTCATGGGATGTGTTTGATGGTGGAGATTGCGTTGAAGAGGGCCCTCACCGGCAGGTGGCGGTTGCCGAGGTTTCTGTCGGGGCCTTTGACCGTCGTATTTTTCATGGCCACCTGTTTTTCCCTGTTCCTGCCGGAGTTCATCCGGTGTCGGATTGACGTCAGGGCGTTTGAGGAATACGCCGCCTTGGGCCACCTTCTTACACCTCTCAGTTCCTCACTCTCAGCCATCTTTCATAACAAATCTTAG 1185 0.4928 MEGEIMNLMKVWLSVVVSLCYCYWIRKLIPAGTIRLFLFLPIVFLFIVLPLSLSSVHLCGTTGFFVAWLGNFKLLLLAFDKGPLSSDAFISLPRFVAVACLPIKIQKNPPRSTTIQCSSAQNGKTPHPDSSKRSGFDTNPSSIKPNSVTKQNLSGVSSKKAGGTPLLGYALKGIAVAILVKIYDYSESINPNVLMCMYCFHIYFMLEIILAVVAAAAKAMLGMELEPQFKNPLLSTSLQDFWGRRWNLMVTSILRPTVYEPTMKAALKVVGPTWAPLPAVMGTFVVSGLMHELILFYLGRSEPTFRMTCFFLLHGMCLMVEIALKRALTGRWRLPRFLSGPLTVVFFMATCFSLFLPEFIRCRIDVRAFEEYAALGHLLTPLSSSLSAIFHNKS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0122 394 Pfam Membrane bound O-acyl transferase family 226 312 IPR032805 -
Vra2g0122 394 PANTHER ACYL-COA--STEROL O-ACYLTRANSFERASE 1 2 381 - -
Vra2g0122 394 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 2 381 IPR044851 GO:0006629|GO:0008374
Vra2g0122 394 MobiDBLite consensus disorder prediction 109 157 - -
Vra2g0122 394 PIRSF Wax_synthase 143 394 IPR017088 GO:0008374
Vra2g0122 394 PIRSF Wax_synthase 1 127 IPR017088 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0122 Vra-Chr2 954163 955943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0122 7 388 Miscellaneous Gene Families AT3G51970 46.214 9.60e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0122 - - vun:114169084 673.315