Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0113 ATGTCAGTGACATTCATATTCACACTTTCTGTTGCCATACTATGTGCTGCTTCAGCCTTTGCAGCAGTTCAACACAGATCACCAGAAGTTTACTTGCAGAATGGTAACTTTGAGGAGAAACCAGACCCCAGATACCTCAAGAAAAGTAGACTCATTGGGAAATATGCTCTTCCAAAATGGGAGATCAATGGTCATGTTGAGTATGTGTCAGGAGGGCCACAACCTGGAGGCATGTACTTCCCAGTTAGTGATGGAGTGCATGCTGTGAGGCTTGGAAATGAGGCTTCAATCTCACAAACTGTGAGGGTTAAGCCTGGGAAATGGTATGCTCTAATTGTAGGAGCCTCAAGGACTTGTGCTCAAGATGAGATGTTAAGGATCTCAGTGCCTCCACACTCTGGAGATGTTCCTTTGCAGACCCTTTATAGCCTCAATGGTGATGTTATTGCTTGGGGATTCAAGTCCATTTCTTCTGTTGCAAAAGTGATTTTCCATAACCCTGGAATTCAAGAAGATCCTTCATGTGGTCCACTGTTGGATGCTGTTGCTATTGCTCAGTTCAACCCTCCAAAGCCTACAAGAGATAATTTGGTTAAAAATAGTGGCTTTGAGGAGGGTCCATTCCCTATTTTCAACACTTCAAACGGTGTTCTGCTACCTCCCAAACAAGAAGATCTTGTGTCTCCACTACCTGGTTGGATAATTGAATCCATCAAAGCCGTGAAGTTCATAGATTCAAAGCATTTTAGTGTCCCACTTGGACATGGAGCAATAGAGCTTATTGCAGGCAGGGAAAGTGCCATTGCCCAAATTCTCAGAACAGTTCCCAACAAAGTCTACAACATGAAGTTCACAGTTGGAGACGCCAAAAATGCTTGTCACGGATCGATGATGGTTGAAGCATTTGCAGCAAAAGATACCCTCAAAGTTCCCTTCAAATCGGAAGGAAAAGGAAAATTCAAGACTGTGAGCTTCAAGTTCAGAGCAATTGAAAACAGAACTCGAATAACATTCTACAGCTCTTTCTACCATACAAGAATTCACGACTATGGATCTCTTTGTGGCCCTGTTATTGATCAAGTTATAGTGTCTCCTGTTGCCTAA 1104 0.4293 MSVTFIFTLSVAILCAASAFAAVQHRSPEVYLQNGNFEEKPDPRYLKKSRLIGKYALPKWEINGHVEYVSGGPQPGGMYFPVSDGVHAVRLGNEASISQTVRVKPGKWYALIVGASRTCAQDEMLRISVPPHSGDVPLQTLYSLNGDVIAWGFKSISSVAKVIFHNPGIQEDPSCGPLLDAVAIAQFNPPKPTRDNLVKNSGFEEGPFPIFNTSNGVLLPPKQEDLVSPLPGWIIESIKAVKFIDSKHFSVPLGHGAIELIAGRESAIAQILRTVPNKVYNMKFTVGDAKNACHGSMMVEAFAAKDTLKVPFKSEGKGKFKTVSFKFRAIENRTRITFYSSFYHTRIHDYGSLCGPVIDQVIVSPVA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0113 367 PANTHER OS02G0527500 PROTEIN-RELATED 10 366 - -
Vra2g0113 367 Pfam Protein of unknown function (DUF642) 196 363 IPR006946 -
Vra2g0113 367 Pfam Protein of unknown function (DUF642) 31 184 IPR006946 -
Vra2g0113 367 Gene3D - 192 347 - -
Vra2g0113 367 PANTHER F17A17.37 PROTEIN 10 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0113 Vra-Chr2 884944 887117 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0113 - - gmx:100812299 664.84