Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0108 ATGGCAAATGCTTTGAGAGTTGGTTGTGTTATCTCTCTCTGCTCCTTACGGAATACCACATCCTATCTTCCCCTTCTCTCCAACGCCACGCGCTTCCGTTCCAAGTTCCCGTTTTTCACCCTCTCATCGTCGCAAAACTCATTTGGGTCTCCTTCATTTCGAACACTCTCTTCTTCTTCCATTGATGAAGCAGTAACCACCGAAGCCATCACGGGGAATGCAGGTGGTGAAGCTGAGAGCAGTATTAGGGACTCCGCGGGGCTGCTTGACATAAGGGTTGGACGCATTCTGAGGGCATGGAAACACGATGAAGCTGATTCTCTGTATGTTGAAGAGGTTGATATCGGTGAGCCTGAACCCAGAATCATATGCAGTGGCCTTGTCAAGTACATCCCTATTGAACACCTTCAGGGAAAAAAGGTTATTGTCCTTTCCAACCTGAAGCCAAGAAATATGCGTGGTGTCAAGTCCTGCGGAATGCTGATGGCGGCTTCTGATGCAAAGCATGAGAATGTTGAACTTCTGTTCCCTCCTGAGGAAGCAACTCCTGGTGAAAGAATATGGTTTGGAACGGAAGATGAAAAAGATAATCAACCTGATGCTGCCACTCCGAATCAGATACAAAAGAAAAAGATATGGGAATTGGTGCAACCTCATCTTAAGACAGATGTTTCATGCATTGCGATGCTAGGGGAGCATGTCATGCGTACATCTGTAGGTTCAGTAGCATGCCAGTCCTTGCAGAATGCAAATATCTCCTGA 762 0.4672 MANALRVGCVISLCSLRNTTSYLPLLSNATRFRSKFPFFTLSSSQNSFGSPSFRTLSSSSIDEAVTTEAITGNAGGEAESSIRDSAGLLDIRVGRILRAWKHDEADSLYVEEVDIGEPEPRIICSGLVKYIPIEHLQGKKVIVLSNLKPRNMRGVKSCGMLMAASDAKHENVELLFPPEEATPGERIWFGTEDEKDNQPDAATPNQIQKKKIWELVQPHLKTDVSCIAMLGEHVMRTSVGSVACQSLQNANIS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0108 253 CDD tRNA_bind_EMAP-II_like 84 188 - -
Vra2g0108 253 SUPERFAMILY Nucleic acid-binding proteins 85 252 IPR012340 -
Vra2g0108 253 Gene3D - 85 253 IPR012340 -
Vra2g0108 253 ProSiteProfiles tRNA-binding domain profile. 85 188 IPR002547 GO:0000049
Vra2g0108 253 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 73 253 - -
Vra2g0108 253 Pfam Putative tRNA binding domain 91 186 IPR002547 GO:0000049
Vra2g0108 253 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 73 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0108 Vra-Chr2 841685 844082 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0108 - - var:108338794 490.345