Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0107 ATGGGCTGCTCTCAGGATGCTAATGGTTATAGGGGTTTCTTTTACTGTCAGCTAATTCTCTTTATCGTGTGGCTTCCTACTTTTCAAGATGTGACAGCACGAGAAGTACATGCTGACCATAGAAGAATTACTTCTCTGGTAGAGTTAGTTAAGCAACCCGCTTCTGGTGAATCTGGACTCTTTGACCCTATAGAAATATCACCTGCTGTCTTACCAAAATTCCCGTATCCCTCTGAGTCTTTGCCACCAATGTATCCTACTTTCCCAACCAGATATGAACCAGTTTTAACGGGAAAATGTCCCGTGAACTTTTCCCATCCAGGTATATCGAATATACTAGATAGAACAGCATCTGATTGCTCTGGACCTTTAGCAGCCCTTGTAGGGAATGTAATATGTTGTCCTCAGTTTAGTAGCTTGATCCACATCTTCCAGGGTTTCTACAGCATGAAATCCGATGATTTGGTTCTACCTAACGCTGTTTCCAATCATTGTTTTTCTGATATCATTAGTATTCTAGCCAGTAGAGGGGCTAATAGTACGATCCCTACACTATGCTCCATAAAATCATCTAACTTTACAGGCGGGTCATGTCCTGTGAAGGATGATATTACTCTCGAAAAAACAGTCAATACAAGTAAGTTAGTTGAGGCGTGCAGCACTGTTGATCCACTTAAAGAATGCTGCAGACCTGTTTGCCAGCCTGCCATAATGGATGCAGCCCTACAGATTTCTGGAAGACAAACGACGATTAACAATAATGAAAATATGGCCGGGGAAGTGAATCACACTGACTATCTTAATGATTGTAAAGGTGTGGTTTATTCATATCTTTCCAAAAAGCTATCATTTGAAGCTGCAAATACTGCATTCCGGATACTGTCTGCCTGCAAAGTCAATAAAGTTTGTCCTTTGAGTTTTAAGGAGCCTGCTGAAGTAATCAGTTCATGTAAGAATGTAGCTGCCCCTAGTCCTTCCTGTTGTAGTTCATTGAACGCGTATATTGCTGGGATACAAAAGCAAATGTTAATTACAAATAAACAAGCTATAATATGTGCAACACTTTTTGGATCTATGTTGCGTGGAGGTGGAGTGATGACAAATATTTATGAGCTTTGTGATGTTGATTTGAAAGATTTCAGCATACAAGCTTATGGACAACAAGGATGTTTACTTCGGAGCTTGCCTGGAGATGTGATATTTGACAATTCATCCGGCTTTAGCTTTACATGTGATTTGACTGACAACATTGCTGCGCCCTGGCCATCATCATCTTCAATGGCATCTTTGTCACTCTGTGCTCCCGAGATGTCATTACCAGCTCTCCCAACTTCACAAACATTAAAAAATAATGGTTGTAATTCCGGTGGCGTTGGATTGCTTTTGCTTATTTTTTCATTTTTCATCTTCAGTACGCTGTTGTGTTGA 1428 0.4048 MGCSQDANGYRGFFYCQLILFIVWLPTFQDVTAREVHADHRRITSLVELVKQPASGESGLFDPIEISPAVLPKFPYPSESLPPMYPTFPTRYEPVLTGKCPVNFSHPGISNILDRTASDCSGPLAALVGNVICCPQFSSLIHIFQGFYSMKSDDLVLPNAVSNHCFSDIISILASRGANSTIPTLCSIKSSNFTGGSCPVKDDITLEKTVNTSKLVEACSTVDPLKECCRPVCQPAIMDAALQISGRQTTINNNENMAGEVNHTDYLNDCKGVVYSYLSKKLSFEAANTAFRILSACKVNKVCPLSFKEPAEVISSCKNVAAPSPSCCSSLNAYIAGIQKQMLITNKQAIICATLFGSMLRGGGVMTNIYELCDVDLKDFSIQAYGQQGCLLRSLPGDVIFDNSSGFSFTCDLTDNIAAPWPSSSSMASLSLCAPEMSLPALPTSQTLKNNGCNSGGVGLLLLIFSFFIFSTLLC* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0107 475 Pfam SPARK 97 255 IPR043891 -
Vra2g0107 475 PANTHER GPI-ANCHORED PROTEIN 1 473 IPR040336 -
Vra2g0107 475 PANTHER GPI-ANCHORED PROTEIN 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0107 Vra-Chr2 835937 840314 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0107 - - gmx:100809087 835.484