Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0105 ATGGCTGTGGCTTCCTTCTCCCACTTCTCCGCTGGGCGCTCTTTATCTCTACAAAACCGTTATTCACTGCCGCTACCTTCCTGCACTCTCTCATTCCGTCCCACAAACTCTTATGCCTACGCTCCCCTGTTCACATCTCTTCGAACTCCCGCACCCTCCATTACTGCAGCTGCCCACGGCGGAGGGACCGGAGGAGGGCATGGAGGAGGTGGAGGTGGAGGAGAAGGAGGAGGAGGCGACGGGGAATCGGAAGACAGGGATCGAAACAGAGAGGAGGCACTCCTGGTTCTCGCGGAGGCAGGACGGCCGCTGGAGAAATTGCCGGCGGATTTAGCGGCGGCGGTTGAGGCGGGGCGAGTTCCGGGGTCGATTTTGAAGAGGTTCTTCGAGCTTGAAAAATCGGCGGTGTTCCGGTGGTTGCTGAATTTCGGAGGGTTTAAGGAGAGGTTGCTAGCGGATGATTTGTTCCTTGCCAAGGTTGGCATGGAATGCGGTGTTGGCATCTTTACGAAGACTGCTGCGGAGTTGGAGAAGCGCAAAGAAAATTTTAGTAAGGAGCTTGATTTTGTTTGTGCCGATGTGATAATGGCCATTGTAGCGGATTTTATGCTTGTGTGGCTTCCTGCTCCCACAGTTTCTCTCCGACCACCACTTGCTGTTAGTGCTGGAATTCTTGCTAAAGTCTTCTATGGCTGCCCTGAAAACGCTTTTCAGGTGGCTTTGGCCGGAAGCTCATATACACTCATCCAGAGAATAGGTGCTATAGTGCGTAACGGTGCAAAGCTATTTGCTGTTGGGACTGGTGCATCACTGATTGGTACAGGTATAACAAATACACTGATCAATGCAAGAAAATTGGTTGACAAATCTTTTGCCGCTGAGGCGGAGGATTTGCCGGTATTATCGACAAGTGTTACCTATGGGGTTTACATGTCAGTATCTAGCAACTTAAGGTACCAATTAATAGCTGGAGTTATTGAACAACGGATTCTAGAACCTTTGTTGCACCAGCACAAGCTTGTGCTGAGTGCAATTTGCTTTGTTGTTAGAACTGGAAACACTTTCTTGGGCTCATTATTGTGGGTGGATTATGCTCGCTGGGTTGGAGTCCAGAGGAGTCGGGATTAG 1128 0.5044 MAVASFSHFSAGRSLSLQNRYSLPLPSCTLSFRPTNSYAYAPLFTSLRTPAPSITAAAHGGGTGGGHGGGGGGGEGGGGDGESEDRDRNREEALLVLAEAGRPLEKLPADLAAAVEAGRVPGSILKRFFELEKSAVFRWLLNFGGFKERLLADDLFLAKVGMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLRPPLAVSAGILAKVFYGCPENAFQVALAGSSYTLIQRIGAIVRNGAKLFAVGTGASLIGTGITNTLINARKLVDKSFAAEAEDLPVLSTSVTYGVYMSVSSNLRYQLIAGVIEQRILEPLLHQHKLVLSAICFVVRTGNTFLGSLLWVDYARWVGVQRSRD* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0105 375 Pfam Protein RETICULATA-related 148 325 IPR021825 -
Vra2g0105 375 PANTHER OS05G0388600 PROTEIN 16 374 - -
Vra2g0105 375 MobiDBLite consensus disorder prediction 55 88 - -
Vra2g0105 375 Coils Coil 173 193 - -
Vra2g0105 375 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 16 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0105 Vra-Chr2 822713 826605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0105 - - gmx:100808020 567.385