Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0102 ATGGAGCCTTTGCTGCAATTCGCACCGATGCAGAGCTCCGTCGACGAGGGTTTCTGGCACCGATTGTCTTCCTTGAAGCTTAACAAGCTTGGCATTGACGATTCTCCAATTCACATATTCGGCTTTTATGCACCTTGCTCTCACTCTCAAGTATCAAATCATTTAACTGTTTTATCCGAGTCTTTACCTTCTGAGTTGAACGAGGCATCGTTAATTCCAGAACCGAGCCGCGGCAACCGGAACAGGTGCTCTGTTCCGGGGATACTTTACAATACTAATACTGTGGAGAGCTTCCATGCACTTGATAAGCATGACCTGCTGAAGAAAGAAGCAGCAAAGATATGGGATGATATTCTAACTGGAAAAGCTGTGGAGGACTGTTCAGTACTTTCGAGATTCCTTGTTATTTCTTTTGCTGACCTGAAAAAGTGGACTTTCAACTATTGGTTTGCTTTCCCTGCTCTCATGCTTGATCCTCCAGCAACTGTGGTTAATCTAAAGCCAGCTTCTCAGTGGTTCAGCGCAGCCGAGGCTGAATCCCTCTCTGCAGCGTGTAACGAGTGGCGCAGCTCAAAATCAACAGCAGATGTCCCATTCTTTTTAGTCACCATAGATCAACACTCATGCGCTACTGTCAGGCTTCTGAAGGACTGGGAAGCTTGTCAAGGCAATGGTAACAAGATCTTTTTTGGATTTTATGATCCATGTCATCTCCCAAAGAATCCTGGATGGCCTCTTCGCAACTTCTTAGCACTTATTTCTGTGAGGTGGAATCTCAACTCAATTCAATTTTTCTGCTACAGAGAGAACCGTGGTTTTGCAGATATGAAGTTGTCTCTTGTTGGTGAAGCATTGATAACAGTTCCACAAGGGTGGAAAGACACAGTGCCCAGTGCAGTTGGATGGGAACTTAATAAGGGGAGAAAAGCTTCTAGGTGTATAAGCCTTGCACAGTCCATGGATCCAACCAGATTGGCCATATCTGCTGCAGATTTGAATTTAAAGCTTATGAGGTGGCGTGCTTTGCCATCTCTTGACTTGAATGCCTTATCTTCCATGAAGTGTCTTCTCCTTGGGGCTGGCACACTTGGATGCCAGGTCGCACGCATGCTTATGGCATGGGGTGTTCGAAAAATTACTCTAGTTGACAATGGTAGGGTGGCTATGTCTAACCCATTGAGGCAGTCTCTTTATACTTTGGATAACTGTCTTAATGGTGGTGAATTTAAAGCTACTGCAGCAGTTGAAAGTCTCAAACGGATATTTCCAGCAGTGGAAGCAGAAGGTATTGTTATGGCTATACCAATGCCTGGACATCCCATACAAAGCCAGGAACACGATAGTGTGCTTGATGATTGTAAAAGGTTGCGTGATTTAATTGAGGCTCACGATTCAGTTTTTTTGTTAACCGATACAAGGGAAAGTCGATGGCTGCCAACACTTCTCTGTGCCAATACTAACAAGATTACCATTACTGCTGCACTAGGGTTTGACAGTTTCTTGGTTATGCGCCATGGAGCTGGTCCTTTAAGTCAGGCCCACAAGTTGAATGCTGAAATTATTAATTCTTCATCTGTTGATATGCCAGTAAATGATGCAAATGGAAAGCATAGATTGGGCTGTTATTTCTGCAGTGATGTTGTTGCACCTACCGATTCAACGTCCAACCGTACATTGGACCAACAATGTACAGTGACCCGACCAGGGCTGGCTCCTATTGCTTCAGCCCTTGCAGTTGAACTTCTAATCGGGATTTTGCATCATCCTCAAGGGATATTTGCAGCAGGTGACATTAACAACAGTGTCGATCGAGCTACTGAGCAACCTCTTGGTATTTTACCTCATCAGATTCGCGGCTCCCTTTCTCAATTTTCTCAAATGACCCTTATAGGTTACTCCTCCGCCAGCTGCACTGCCTGTAGTCATACAGTTGTATCAGAATACCGAAACCAAGGAATGGAGTTCATATTTCAAGCAATTAATCATCCTACTTACCTAGAGGATCTCACTGGACTGACAGAGTTGATGAAATCAGCCACCTCCTTGGATTGGGACGGGGAGATAGACGAGGAGGATGAAGACTGCGTTGAAATTTAA 2097 0.4459 MEPLLQFAPMQSSVDEGFWHRLSSLKLNKLGIDDSPIHIFGFYAPCSHSQVSNHLTVLSESLPSELNEASLIPEPSRGNRNRCSVPGILYNTNTVESFHALDKHDLLKKEAAKIWDDILTGKAVEDCSVLSRFLVISFADLKKWTFNYWFAFPALMLDPPATVVNLKPASQWFSAAEAESLSAACNEWRSSKSTADVPFFLVTIDQHSCATVRLLKDWEACQGNGNKIFFGFYDPCHLPKNPGWPLRNFLALISVRWNLNSIQFFCYRENRGFADMKLSLVGEALITVPQGWKDTVPSAVGWELNKGRKASRCISLAQSMDPTRLAISAADLNLKLMRWRALPSLDLNALSSMKCLLLGAGTLGCQVARMLMAWGVRKITLVDNGRVAMSNPLRQSLYTLDNCLNGGEFKATAAVESLKRIFPAVEAEGIVMAIPMPGHPIQSQEHDSVLDDCKRLRDLIEAHDSVFLLTDTRESRWLPTLLCANTNKITITAALGFDSFLVMRHGAGPLSQAHKLNAEIINSSSVDMPVNDANGKHRLGCYFCSDVVAPTDSTSNRTLDQQCTVTRPGLAPIASALAVELLIGILHHPQGIFAAGDINNSVDRATEQPLGILPHQIRGSLSQFSQMTLIGYSSASCTACSHTVVSEYRNQGMEFIFQAINHPTYLEDLTGLTELMKSATSLDWDGEIDEEDEDCVEI* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0102 698 Gene3D - 10 316 IPR042522 -
Vra2g0102 698 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 5 689 IPR045886 -
Vra2g0102 698 CDD Apg7 354 672 - -
Vra2g0102 698 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 346 666 IPR035985 GO:0008641
Vra2g0102 698 Gene3D - 5 288 IPR042523 -
Vra2g0102 698 PANTHER UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME ATG7 5 689 - -
Vra2g0102 698 Gene3D - 320 696 - -
Vra2g0102 698 Pfam ThiF family 334 590 IPR000594 -
Vra2g0102 698 Pfam Ubiquitin-like modifier-activating enzyme ATG7 N-terminus 5 320 IPR032197 -
Vra2g0102 698 TIGRFAM E1_like_apg7: E1-like protein-activating enzyme Gsa7p/Apg7p 7 692 IPR006285 GO:0005737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0102 K08337 - gmx:100781725 1263.06