Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0088 ATGGGTGCAATGGAGGGTCTCTTAGCTTTAGCTTTGGTTCTGAATGCTGTTGTGGTGTGTAATGGAGGCTCGAGCAGCCTCTTCACTAGGAAAACTGAGAAGACTGTGGATATGCCACTTGACAGTGATGTGTTTTCGGTTCCTCCTGGTTATAATGCTCCTCAGCAAGTTCATATAACGCAAGGTGACCTTGTGGGGAGGGGGATGATAGTGTCATGGGTGACGATGGATGAACCGGGGTCGAGTGCAGTGCGTTACTGGAGTGAGAACAGTGGGGAGAAGAAGATTGCAGAAGGAAAAATTGTTACTTATAGGTTCTTCAATTACTCATCTGGGTTTATTCATCACACCACTATCAGACATTTGGAGTACAACACCAAATACTACTACGAAGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTAACTCCACCTGAAATTGGNCCTGATGTNCCATACACATTTGGTCTTATAGGGGATCTTGGTCAGAGTTTTGATTCAAATTTGACGCTTTCTCACTATGAATTGAGTCCAAAAAAGGGACAAACTGTACTGTTTCTTGGAGACCTCTCCTATGCGGATCAGTACGAGAATCATGATAATGTGAGGTGGGATACTTGGGGAAGGTTTACAGAAAGAAGTGTTGCATATCAACCATGGATTTGGACTGCAGGGAACCATGAACTAGATAATTATCCAGAAATTGGTGTAACCGTACCTTTCAAGCCTTATTCCCATCGTTATCATGTTCCTTACAAAGCATCTCAGAGCACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGTCCTCATATTCTGCATATGGCAAATATACGCCACAGTATAGATGGCTTGAACAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATGCACCTTGGTACAATAGCTATAATTATCACTACATGGAAGGAGAAACAATGAGAGTAATGTTCGAAACCTGGTTTGTGGAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTGCATGCCTATGAACGATCTGAACGTGTTTCTAACATTGCATACAACGTTGTAAATGGCATTTGCACTCCTGTAAAAGATCAATCAGCTCCTGTATATATCACCGTTGGTGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAACCTGAGTATTCTGCATATAGAGAAGCCAGCTTTGGACATGCCATGTTTTCCATAAAGAACCGAACGCATGCTCATTACAGCTGGAACCGAAATCATGATGGAATTGCCGTGGAGGCTGATTCCGTTTGGTTTTTCAATCGATACTGGCACCCAGTTGATGATTCCACTGTTCATGAGTGA 1389 0.432 MGAMEGLLALALVLNAVVVCNGGSSSLFTRKTEKTVDMPLDSDVFSVPPGYNAPQQVHITQGDLVGRGMIVSWVTMDEPGSSAVRYWSENSGEKKIAEGKIVTYRFFNYSSGFIHHTTIRHLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNLTLSHYELSPKKGQTVLFLGDLSYADQYENHDNVRWDTWGRFTERSVAYQPWIWTAGNHELDNYPEIGVTVPFKPYSHRYHVPYKASQSTSPFWYSIKRASAHIIVLSSYSAYGKYTPQYRWLEQELPKVNRTETPWLIVLMHAPWYNSYNYHYMEGETMRVMFETWFVEYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITVGDGGNLEGLATNMTEPQPEYSAYREASFGHAMFSIKNRTHAHYSWNRNHDGIAVEADSVWFFNRYWHPVDDSTVHE* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0088 462 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 147 IPR008963 GO:0003993|GO:0046872
Vra2g0088 462 Pfam Purple acid Phosphatase, N-terminal domain 54 145 IPR015914 GO:0003993|GO:0046872
Vra2g0088 462 SUPERFAMILY Metallo-dependent phosphatases 151 458 IPR029052 -
Vra2g0088 462 PANTHER ACID PHOSPHATASE RELATED 8 460 IPR039331 GO:0003993
Vra2g0088 462 CDD MPP_PAPs 151 449 IPR041792 -
Vra2g0088 462 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Vra2g0088 462 Gene3D - 53 149 - -
Vra2g0088 462 PANTHER PURPLE ACID PHOSPHATASE 8 460 - -
Vra2g0088 462 Pfam Iron/zinc purple acid phosphatase-like protein C 380 439 IPR025733 -
Vra2g0088 462 Gene3D - 150 459 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0088 Vra-Chr2 708722 716274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0088 41 437 Miscellaneous Gene Families AT1G13900 25.380 2.78e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0088 K22390 - gmx:100815854 877.085