Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0087 ATGGGCGTGTCTTCGAACGAATCGATACAATTATGCATTTTTGATCTGAGGAGAGGGCAACATGAGGGCCAAGAGCTTGATAAGATCCTCTTCTTCTTCCCCGCAGGCTTGCCCTTCTCCAAGCAACTCTCCGTCATTGGTCTCAGCGAAGGACTCATTACTTTCACAAGAATCTTCTCGCCTGAGGCTGCTTGCGAGGTCATCGAAGCTGAGCGACATTCTCACGTTTTCCACGAGGCCGAACCTGATATCTGGATGGTCATGTTGGTGGAGAAAAGCAACGACTCAGAGCCTATCTGGAGAGATGATGCGTTAAGAAAAGTTCTCAAGGAAATTCACTCACTTTTTGTAATGTTTCATGGATCTGTTCGAGCAATGCTGGAGAAAGAACCTGGTGGAGGACTAGCAAGACGACATTTATATTCCTTTATCATGGATTATCTGAGGGATTTTCTTGCGGGGAGAAAGCTTCTTTTACCATCCTTCCGTGATTGTCTCAAGGAACGTGGAACTGTGCAGATGCTGACAATTGGTCGAGAGGCTGCAATTGAGGTTCAGTCCCTTGTCCGAGTGCTTGAATCGTCTGCTGGGAACAGCCTCTGTTACTCTCTGATTTTATTTCAAGACCTGCTAGTGTCCACAACTTTATCTCCTGATGATACCATAAATTTATTCACATATGCGGTGCTAAGGTTGACTCCCCATGCTTTATCTTCTGGATCAAGTTCATGGTCCTACTTAAGGAAAGGAAGTACTGCATCCAATGTTGCCATTGAGTCTAACTCGGCCAATCCAAACTCTTTGTCTGAAAGTTTATATGGCACATCTGATATATCATCTGGTGAAGATAACCACTATCATGTCGTGAGGCCCTTACAGAGTGACAAATGGTCTAAAGGAAAAGATGGTTATCTTGTCACTGATTTATGGGGTGCAGAAGTTGGTACGTGGGTGTTTGCCACTCCCACAGTTTGGCTTCAACAGACAGGAGAGAAAATGTACCTCTGTGTTTACCAGCATAAAAGCCTTACTTTAATGCTTATGATTCCTGTATCAGCTGTACCCAGTGGGGAGCAAGGTGTGTCGGAAGTGAGGCGGCAAATTATTGAAAACGCATCACTTCAGATATTGAAAGTTGAAGAGAAGCTATCCAAAGGATGGGGTGGTGAGAATGCATATCACGTCGGTGGGTACCGCTACTTACTAGTAGATGGTGATAGAAATGTATCGAGGGCTTCTCCAGCAACAAAAGTAACAACTTTAACAAAGGAGTCTTTGCTTGCCATGAATAAGCTTAGGCAAGAAGTGGAGTTGGAAAAGAGAAGAGCGAAACTGGATGGCTGTAATTTTGAAAAAGATTTAGAGATGTGCATTAGAACAAAAAACAATGCATGGGTTATTTCTCGAGTCACAAGAGGGAAGGAGCTTTATATGGTTCTAGAGAAAGCCAGTGAAACCCTTCTATATGCCTCAGATGCTGTTGAGAAGTTTAGCGACAGGTATTGCGATGGAGCATTTTCACTGGACTAG 1530 0.4392 MGVSSNESIQLCIFDLRRGQHEGQELDKILFFFPAGLPFSKQLSVIGLSEGLITFTRIFSPEAACEVIEAERHSHVFHEAEPDIWMVMLVEKSNDSEPIWRDDALRKVLKEIHSLFVMFHGSVRAMLEKEPGGGLARRHLYSFIMDYLRDFLAGRKLLLPSFRDCLKERGTVQMLTIGREAAIEVQSLVRVLESSAGNSLCYSLILFQDLLVSTTLSPDDTINLFTYAVLRLTPHALSSGSSSWSYLRKGSTASNVAIESNSANPNSLSESLYGTSDISSGEDNHYHVVRPLQSDKWSKGKDGYLVTDLWGAEVGTWVFATPTVWLQQTGEKMYLCVYQHKSLTLMLMIPVSAVPSGEQGVSEVRRQIIENASLQILKVEEKLSKGWGGENAYHVGGYRYLLVDGDRNVSRASPATKVTTLTKESLLAMNKLRQEVELEKRRAKLDGCNFEKDLEMCIRTKNNAWVISRVTRGKELYMVLEKASETLLYASDAVEKFSDRYCDGAFSLD* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0087 509 PANTHER UNCHARACTERIZED 4 509 IPR013176 GO:0016192|GO:0035658
Vra2g0087 509 Pfam First Longin domain of INTU, CCZ1 and HPS4 12 121 IPR043987 GO:0016192
Vra2g0087 509 PANTHER VACUOLAR FUSION PROTEIN CCZ1 HOMOLOG B 4 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0087 Vra-Chr2 695825 701267 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0087 - - gmx:100792001 911.753