Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0085 ATGAGCCGGCCAATGGAGGAAGATACTGCTGCGGGGAAGAATGAGGAAGAGGAGTTCAACACTGGACCACTATCTGTACTAATGATGAGTGTTAAAAATAATACCCAGGTATTGATAAATTGTCGGAATAACAAAAAACTTCTGGGTCGTGTAAGAGCTTTTGATAGGCACTGTAACATGGTTCTTGAAAATGTCAGGGAGATGTGGACCGAGGTGCCCAAAACTGGTAAAGGAAAGAAAAAGGCCCAGCCAGTGAACAAGGATAGATTCATTAGCAAAATGTTCCTCCGTGGAGATTCTGTCATCATTGTTCTTAGGAACCCCAAATGA 330 0.4273 MSRPMEEDTAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0085 109 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 109 - -
Vra2g0085 109 Pfam LSM domain 30 104 IPR001163 -
Vra2g0085 109 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 109 IPR027248 GO:0008380|GO:0030532
Vra2g0085 109 MobiDBLite consensus disorder prediction 1 22 - -
Vra2g0085 109 Gene3D - 17 109 - -
Vra2g0085 109 SUPERFAMILY Sm-like ribonucleoproteins 22 107 IPR010920 -
Vra2g0085 109 CDD Sm_D2 19 108 IPR027248 GO:0008380|GO:0030532
Vra2g0085 109 SMART Sm3 27 106 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0085 Vra-Chr2 688401 695039 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0085 K11096 - qsu:112006547 217.238