Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0076 ATGTCGTTTCGGTCGGAGAATCAGAACCCAAACCCTACAACTCCCACTCCGCCATTGAAGAAGCGTTGGTCAGACTTATGGACCAAATCCAAACCCATAAACCAAATGGTCATGGCAATGAAGCTTCGCTCTCTCTCTCCTCGCCGCGCAGCCAAAGCCGACGCCACTCTCTCTCCTTTCCCCGCCGTCGCCATCGCCGACCGAACCCTTCTCCTCTCCGACCAGATTCTCCTCAAAATCCTCGCACTCGTCTCCGACTCCCCCGCTCAGCGAAACTCCAACTCTCTTGTCTGCAAGCGCTGGCTCAATCTCCAAGGCCGTCTCCTCCGCTCCCTCACAATCTCCGACTGGAACTTCCTCCTCTCCGGCAGACTCATCCACCGCTTCCCCAATCTCAACCACGTCGACTTGCTCTCCGCCGCCTTCATTTCACCTCGTAATTCCGCCATTCTCCTCAGCCACCGCGTCCTCTCCGTGCACCTCCATTCCGACCTCGCCCCCAATTGGTGCTTCTGCGAGGAAAACATGCTCCCCGTCGAAGTCATCGACAACGGACTCGCCACCCTCGCCGCCGGCTGCCCCAACTTGCGCCGCCTCCACGTCATCGGCGCCAGCGAGATGGGGCTGCTGAGCGTCGCGGAGGAGTGTCCCACTCTGCAGGAACTCGAACTGCAGTGCTGCAGCGACAACGTTCTGCGCGGGATTGCTGCATGTGCGAATCTTCAGATTCTGAAGCTCGTTGGGCATGTTGATGGGCTCTACAGTTCGGTGGTTTCTGATATTGGTTTGACAATTCTGGCGCAGGGGTGCAAGAGGCTGGTGAGGTTGGAGCTTTGTGGGTGCGAAGGGAGTTTTGATGGGATTAAGGCCATTGGGAAGTGTTGTTTAATGTTGGAGGAGTTGACGTTTTCTGATCATAAGATGGATGATGGATGGCTTGCTGCTATCCCCTTTTGTGAGAATTTAAAGACTTTGAGGTTTCAGTCTTGTAAGAGGATTGATTCCAATCCTGGAATGGAGGAGTATTTGGGTTCTTGCTCTGCTCTTGAAAGGTTGCATTTGCAGAAATGTCAGCTTCGGGATAAGAAGAGCGTTTCGGCTCTGTTTTCTGTGTGCAGGGCTGTCAGGGAGATTGTTCTTCAGGACTGTTGGGGATTGGATAATAGCATCTTCTCATTTGCAATGATGTGCAGGCGGGTAAAGTTGTTTTACTTGGAAGGGTGCTCATTATTAACGACAGAAGGTTTGGAGCACGTAATTCATTCATGGAAGGAGCTTCAGAGCCTTAGAGTAGTGTCATGTAAGAATATAAAGGAGTGCGAGATCTCTACTGCGCTGGCAACCCTGTTTACCAGTCTCAAGGAGTTGAGATGGAGCCCTGATACCAAATCACTTCTTCAATCCAGTGTTACAGGGATAACCATGGCAAAAAAAGGTGGTAAATTTTTCAAAAGGGCTCGATGA 1464 0.5198 MSFRSENQNPNPTTPTPPLKKRWSDLWTKSKPINQMVMAMKLRSLSPRRAAKADATLSPFPAVAIADRTLLLSDQILLKILALVSDSPAQRNSNSLVCKRWLNLQGRLLRSLTISDWNFLLSGRLIHRFPNLNHVDLLSAAFISPRNSAILLSHRVLSVHLHSDLAPNWCFCEENMLPVEVIDNGLATLAAGCPNLRRLHVIGASEMGLLSVAEECPTLQELELQCCSDNVLRGIAACANLQILKLVGHVDGLYSSVVSDIGLTILAQGCKRLVRLELCGCEGSFDGIKAIGKCCLMLEELTFSDHKMDDGWLAAIPFCENLKTLRFQSCKRIDSNPGMEEYLGSCSALERLHLQKCQLRDKKSVSALFSVCRAVREIVLQDCWGLDNSIFSFAMMCRRVKLFYLEGCSLLTTEGLEHVIHSWKELQSLRVVSCKNIKECEISTALATLFTSLKELRWSPDTKSLLQSSVTGITMAKKGGKFFKRAR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0076 487 MobiDBLite consensus disorder prediction 1 24 - -
Vra2g0076 487 SMART LRR_CC_2 270 294 IPR006553 -
Vra2g0076 487 SMART LRR_CC_2 216 238 IPR006553 -
Vra2g0076 487 SMART LRR_CC_2 346 371 IPR006553 -
Vra2g0076 487 SMART LRR_CC_2 397 422 IPR006553 -
Vra2g0076 487 PANTHER UNCHARACTERIZED 49 467 - -
Vra2g0076 487 PANTHER F-BOX PLANT-LIKE PROTEIN 49 467 - -
Vra2g0076 487 SUPERFAMILY RNI-like 107 247 - -
Vra2g0076 487 Gene3D Ribonuclease Inhibitor 68 285 IPR032675 -
Vra2g0076 487 Gene3D Ribonuclease Inhibitor 286 479 IPR032675 -
Vra2g0076 487 SUPERFAMILY RNI-like 254 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0076 Vra-Chr2 638728 641119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0076 K10268 - gmx:100812193 795.038