Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0073 ATGTCAAAGAATAAAGATGCTACCAATCTCTCACGCACCTTTAAATACCTATTAGCTACCCAGTTCTTGTCACGAGGGATTCCATTTATATTCAATACATGGATTGTAAGGCATCTCACACAAGAGGACTATGCGCTGTACGCAGTGCAGTTTCATCTGCTAGTCACATGCATATTATTTCTTAGCCGGGAGGGCTTTCGGCGAGCATGCTTGCGAATGGACCTGAAATGTGATGGCAATTCAATGGGAGATGTTGTGAAGCTAATGAAAGTAGTGTGGATGAGTTTCCCACTTGGAATATTTATTACAATTGTAGTATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTGTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCATGTATTTTGGAGCTCTTGGCTGAGCCTGCGTACATTCTCTCACAAAGCATGGTTTTACTTGAATTACGGCTGATGGTTGAGACTATAGCCACTCTGTTACGATGCTTGACAATGTACTTTCTAATCAGCAAGCAAACTGGAATTGAAAAATCAATCATATTTGGTTTGTCACAGTCTGCATATGGAGCCAGCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTCCCAAAAATTGAAGGTTTCATACCTCTTTCCATTCAGAAAAGGAAAACTGATTGATTTTGACCAGCAGCTGTCCAAGATGTGTATACTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAGGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCATATAATCAGGCAGTATACGGCGTGGTGGACAAATTGGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTCGAAGAAAGTTCGTATGCAACATTTGCAAGGTCTGCTTCAGGACAATATCCAGGAAAAAGCAAGAAATTGGGAAATGGCTTGACGGAATCCCTTAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCGTCGACTGCCCTCCGTTGTTATTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACCGAGAGCCAACTCAAGCGATCTAATGATTCACTACTTATATTCTCGTTGATATATATAATTTTGAATGTCCTGTTAATAAGGTTAGCTGGGGCTGTTGGCTTGATAATGGCAAATTCTCTCAATATGACTCTGAGGATTTTATACTCTGCTATATTCATAAAGAAGTACTTCCAGGGATCTTCCTCATTTTCTTTCTATGAATGCTTGCCGTCAGGATGGATTATTCTGTTACTTTCAGGCATAATCACTCTCATTTCTGAGAATGTCTTTTTGGACCGAGATAATTTCTGGCCATCATTCATGGTCCATTTCTCTGTTGGGCTGGGTTGCTTCTGTGTGTCATCATACGTGATCTATTGCCGGGAAAAAACATTCATCAGAAGACTCATTCGCTTTAATGATCATGTGGACTGA 1557 0.3969 MSKNKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCILFLSREGFRRACLRMDLKCDGNSMGDVVKLMKVVWMSFPLGIFITIVVCLFVFWWQQISYCSPHGQAILINGFACILELLAEPAYILSQSMVLLELRLMVETIATLLRCLTMYFLISKQTGIEKSIIFGLSQSAYGASLFLGYWGYLLLSQKLKVSYLFPFRKGKLIDFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGVVDKLGSLVVRLVFLPFEESSYATFARSASGQYPGKSKKLGNGLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLIFSLIYIILNVLLIRLAGAVGLIMANSLNMTLRILYSAIFIKKYFQGSSSFSFYECLPSGWIILLLSGIITLISENVFLDRDNFWPSFMVHFSVGLGCFCVSSYVIYCREKTFIRRLIRFNDHVD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0073 518 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 4 515 IPR007594 GO:0006488|GO:0016021
Vra2g0073 518 Pfam Rft protein 13 511 IPR007594 GO:0006488|GO:0016021
Vra2g0073 518 CDD MATE_rft1 9 440 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0073 K06316 - gmx:100817452 952.199