Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0072 ATGAAGGTCCCACAATACAGAAGGAAGGAGTGGTTGAAAGTTGTGTGTAGAAGGAAATTACCAGTACAACAAATTAGTGGTAGCAGAGGTTTTGGGTTTTTGGATTTATTAGTCATGGCTCTTCTCACTTTCCCTCACTTTTCTTCTCATTTTCTATCACGCTCTTCCTTCCAAAACATCCATTCTTTCTCTCCAACTCGACGCTACTGTTCGATCAAGGCAACCGGAACGGCGATTCTGTGGTTCAAACACGATCTCCGAACCGATGACCACCCCGCGCTTCTCGCCGCCTCCACCTTTACCTCACTTCTTCCTATATATGTCTTCGATCGCCGCATTCTTTCGCGTTTCTCCGACGAGACGCTGGAACTGCTTCTGCTTGCGCTGCAAGATTTGAGGAAGTCGCTGAAGGATCGCGGTTCCGATTTGATGATCAGATTCGGCAATGCGGACAGCGTCATACAGCAGCTTGCAACGGAGGTCAAAGCCACTTGTGTGTTCGCGGAACAAGAGGTGGAGTATGAGCTACGCCTCATCATAGATGTGCTAAAACAGCGTTTGAAGTCCGTCGGTGGTCCGCAAGGGAGTCCTAGGATTGAATTATTGCAAACTCCGTTTTATGAAGTGAAGGATTTGCAAAAGCTTCCAGCGTCGTATGATGAGTTTAAGAAACATCGACTTCCTGTGACTACACCACTTCAGCTGTCAGTGTCAACGTTGCCTGGTGTAGAGATAGAACTGGACTGGGGTGTTCTCCCCTCGTATGATGATTTAAAGGGATTCATGACCAGCAGCCAACGTAAATCAGGAGAGAACTGGAGGCTAATCAAGGAAGCCTCAGCTGAAACCGTTTTACGCAGAAAAGCATTGGAGTCTGGCGATAGAATTGAAAGAAGTTCTAACTTTGGGCAAACACAATCAAGGGAGCGTAGTGGATCTGTTTTTGTGACAAAAGAAGGAAATGCCGTAGGAGGTGGGACAAACAATGTACTGAATGCACTAGCTGCATATCTAAGATATTTGGAAGGAACAGCTCGTGATGATTGGCAAGAGGTGCATGAAAGAGTGCGTGCTTCTGAAAGTCGGGATGGAGCATCATTTATTGGTCTATTCGGTCCTGCCCTGTCTCTTGGCATTATTTCTAGAAGAAGAGTATATTATGAAGCTATCAAATACGAGCAAGAAAGAAATGCAGGTTTCTTATCACCCTTTGGTTATTCAGCTGCCACAATTGCAGCAGCAGTTGATGCTGTGTGCTCAATGGAGTGGTATTGGCTTATGGCTTTGAGAAATCAGATAAACAATGACGGAGTATACTCAACAAGGATATGGAAATGGAAAGGATTTCTTATCGAGTATACAGTTGCTGGTGAAGATGGTCCTGCCATTCTTCTTGTGCATGGTTTTGGTGCCTTTTGGGAGCATTACCGTGACAACATAAATGGTTTAGCTGAATCTGGAAATAGAGTTTGGGCAATTACTATTTTAGGATTTGGCAAATCAGAAAAGCCAAATGTTGTATATACTGAACTCTTGTGGGCTGAACTATTGAGAGATTTTATTGTTGATGTTGTGGGTGAACCAGTTCACATTGTTGGCAACTCAATTGGCGGTTATCTTGTTGCTATCGTTGCTGGTATTTGGAGTGATTTGATCAAATCCCTTGTTTTGATCAACAGTGCGGGCAATGTCATCCCAAGTTATTCATTCATACCACTGTCTAGAGTTCAGGACAGGCAAACTTCGGGGGCTTCCTGGTTGGGGTCTCGCATTCTTCTATTCTACTTGAGGCTAAGAACTCAGGAGTTACTTAAGAAATGTTATCCAACAAGGGTTGAAAGAGCGGATGATCGGCTCATAAATGAAATGCTAAGAGCATCATATGATCCTGGTGTGCTTGTGGTGTTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTGTAAACTTTCTTCTTGAAGATGTCAAGGAAAAGGTCCTAATCATACAGGGAATGAAAGATCCGATTTCTGATTCCAACTCCAAGGTGGCTATGCTTAAAGAACACTGTGATGGAGTTATAATTAAGGAGTTAGAAGCTGGTCATTGTCCGCACGATGAGGTACCAGAACGAGTGAATACTATTATTTGTGAGTGGATAATTGGTGTAGAAAGTAAAATTTTGGTAGAAAGTCCGGTGTAA 2181 0.4351 MKVPQYRRKEWLKVVCRRKLPVQQISGSRGFGFLDLLVMALLTFPHFSSHFLSRSSFQNIHSFSPTRRYCSIKATGTAILWFKHDLRTDDHPALLAASTFTSLLPIYVFDRRILSRFSDETLELLLLALQDLRKSLKDRGSDLMIRFGNADSVIQQLATEVKATCVFAEQEVEYELRLIIDVLKQRLKSVGGPQGSPRIELLQTPFYEVKDLQKLPASYDEFKKHRLPVTTPLQLSVSTLPGVEIELDWGVLPSYDDLKGFMTSSQRKSGENWRLIKEASAETVLRRKALESGDRIERSSNFGQTQSRERSGSVFVTKEGNAVGGGTNNVLNALAAYLRYLEGTARDDWQEVHERVRASESRDGASFIGLFGPALSLGIISRRRVYYEAIKYEQERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLMALRNQINNDGVYSTRIWKWKGFLIEYTVAGEDGPAILLVHGFGAFWEHYRDNINGLAESGNRVWAITILGFGKSEKPNVVYTELLWAELLRDFIVDVVGEPVHIVGNSIGGYLVAIVAGIWSDLIKSLVLINSAGNVIPSYSFIPLSRVQDRQTSGASWLGSRILLFYLRLRTQELLKKCYPTRVERADDRLINEMLRASYDPGVLVVLESIFSFNLSIPVNFLLEDVKEKVLIIQGMKDPISDSNSKVAMLKEHCDGVIIKELEAGHCPHDEVPERVNTIICEWIIGVESKILVESPV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0072 726 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 76 212 IPR006050 -
Vra2g0072 726 Gene3D HUPs 63 219 IPR014729 -
Vra2g0072 726 PANTHER DNA PHOTOLYASE 69 721 - -
Vra2g0072 726 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 76 239 IPR036155 -
Vra2g0072 726 Pfam DNA photolyase 79 224 IPR006050 -
Vra2g0072 726 Gene3D alpha/beta hydrolase 432 714 IPR029058 -
Vra2g0072 726 SUPERFAMILY alpha/beta-Hydrolases 439 713 IPR029058 -
Vra2g0072 726 Pfam Alpha/beta hydrolase family 463 706 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0072 Vra-Chr2 580829 587179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0072 447 572 Acyl Lipid Metabolism Gene Families AT2G26740 29.323 1.37e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0072 - - gmx:100813721 1172.92